RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PITHD1Q9GZP4 211 aaPredicted RBP14.4□□□□□ -0.1
ACTB-213ENST00000493945 FANCEQ9HB96 536 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 INTS9Q9NV88 658 aaKnown RBP14.4□□□□□ -0.1
ACTB-213ENST00000493945 SOHLH2Q9NX45 425 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 SNX7Q9UNH6 387 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 PCNX2A6NKB5 2137 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 DLX3O60479 287 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 UGDHO60701 494 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 ZBTB11O95625 1053 aaPredicted RBP14.39□□□□□ -0.11
ACTB-213ENST00000493945 C9P02748 559 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 BPGMP07738 259 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 RPS17P08708 135 aaKnown RBP14.39□□□□□ -0.11
ACTB-213ENST00000493945 MYF5P13349 255 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 CREB1P16220 341 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 KCNA4P22459 653 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 CD1CP29017 333 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 PRDX3P30048 256 aaKnown RBP14.39□□□□□ -0.11
ACTB-213ENST00000493945 CCR8P51685 355 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 CCNG1P51959 295 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 PHEXP78562 749 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 SIM1P81133 766 aaPredicted RBP14.39□□□□□ -0.11
ACTB-213ENST00000493945 PRDX1Q06830 199 aaKnown RBP14.39□□□□□ -0.11
ACTB-213ENST00000493945 GTF2H2Q13888 395 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 PCLAFQ15004 111 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 RBBP7Q16576 425 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 GTF2H2CQ6P1K8 395 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 TEX9Q8N6V9 391 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 CCNYL1Q8N7R7 359 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 LINC01555Q8NAE3 123 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 PPFIBP2Q8ND30 876 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 OR2L3Q8NG85 312 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 MGARPQ8TDB4 240 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 ZUFSPQ96AP4 578 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 PYCR2Q96C36 320 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 REPS1Q96D71 796 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 AIF1LQ9BQI0 150 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 TMEM79Q9BSE2 394 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 EFCAB11Q9BUY7 163 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 SEMA6CQ9H3T2 930 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 EHD1Q9H4M9 534 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 PELI2Q9HAT8 420 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 SLC22A14Q9Y267 594 aa14.39□□□□□ -0.11
ACTB-213ENST00000493945 ASXL3Q9C0F0 2248 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 FRYLO94915 3013 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 TMEM114B3SHH9 223 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 G3V2L1 256 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 NTN3O00634 580 aaPredicted RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 B4GAT1O43505 415 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 CRCPO75575 148 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 ANKRD34CP0C6C1 535 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 FTH1P19P0C7X4 201 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 GSTM2P28161 218 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 MLLT3P42568 568 aaPredicted RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 ETV4P43268 484 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 KCNC1P48547 511 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 IRF8Q02556 426 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 LCP2Q13094 533 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 FASTKQ14296 549 aaKnown RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 RSPO4Q2I0M5 234 aaPredicted RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 ZC3H12BQ5HYM0 836 aaKnown RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 ZNF678Q5SXM1 525 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 C10orf62Q5T681 223 aaPredicted RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 CACHD1Q5VU97 1274 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 NKAIN2Q5VXU1 208 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 TMPRSS11BQ86T26 416 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 C10orf107Q8IVU9 208 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 GALNT15Q8N3T1 639 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 CHCHD4Q8N4Q1 142 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 C2orf73Q8N5S3 287 aaPredicted RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 ZNF655Q8N720 491 aaPredicted RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 TTLQ8NG68 377 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 PTCD3Q96EY7 689 aaKnown RBP14.38□□□□□ -0.11
ACTB-213ENST00000493945 TCTN2Q96GX1 697 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 CNDP1Q96KN2 507 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 OR2A14Q96R47 310 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 ACAT2Q9BWD1 397 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 PITPNM3Q9BZ71 974 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 ACTR8Q9H981 624 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 PDE7BQ9NP56 450 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 PFDN4Q9NQP4 134 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 TMEM184CQ9NVA4 438 aa14.38□□□□□ -0.11
ACTB-213ENST00000493945 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 ZNF292O60281 2723 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 TAPBPO15533 448 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 NPHS1O60500 1241 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 SERPINE1P05121 402 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 DHRS4L1P0CG22 281 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 EZRP15311 586 aaKnown RBP14.37□□□□□ -0.11
ACTB-213ENST00000493945 SERPINB1P30740 379 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 ALDH3A1P30838 453 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 CSTF2P33240 577 aaKnown RBP eCLIP14.37□□□□□ -0.11
ACTB-213ENST00000493945 HNF4AP41235 474 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 NAGLUP54802 743 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 INHBCP55103 352 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 PKNOX1P55347 436 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 CLCQ05315 142 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 EIF3IQ13347 325 aaKnown RBP14.37□□□□□ -0.11
ACTB-213ENST00000493945 XKR6Q5GH73 641 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 PHF19Q5T6S3 580 aa14.37□□□□□ -0.11
ACTB-213ENST00000493945 FAM92BQ6ZTR7 304 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms