RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 XKR6Q5GH73 641 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ASTLQ6HA08 431 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 GRHL2Q6ISB3 625 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 TBPL2Q6SJ96 375 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ENPP6Q6UWR7 440 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 HSD11B1LQ7Z5J1 315 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 TMCO2Q7Z6W1 182 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 OFCC1Q8IZS5 231 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 MRPL43Q8N983 215 aaKnown RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 SETD9Q8NE22 299 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CLHC1Q8NHS4 586 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 FRS2Q8WU20 508 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 GLYATL1Q969I3 302 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 TMIGD2Q96BF3 282 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ISOC1Q96CN7 298 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CXorf40BQ96DE9 158 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 APOLD1Q96LR9 279 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 PANX1Q96RD7 426 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 TCF25Q9BQ70 676 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ASPSCR1Q9BZE9 553 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 POLR1BQ9H9Y6 1135 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 PCDH12Q9NPG4 1184 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 SPATA6Q9NWH7 488 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 FAM118AQ9NWS6 357 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CIDEBQ9UHD4 219 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CCL26Q9Y258 94 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 GMEB1Q9Y692 573 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 HSPE1-MOB4S4R3N1 261 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 CLIC1O00299 241 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 ABCB7O75027 752 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 UGT2B11O75310 529 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 LEFTY1O75610 366 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 COX7A2P14406 83 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 TIMP2P16035 220 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 GPX2P18283 190 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 ITPKAP23677 461 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 PTPN6P29350 595 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 RPL3P39023 403 aaKnown RBP9.36□□□□□ -0.91
NPHP3-209ENST00000493732 MAGEA2P43356 314 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 PRLHRP49683 370 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 NEK2P51955 445 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 TMBIM6P55061 237 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 SEMG2Q02383 582 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 VEZF1Q14119 521 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 PLCL1Q15111 1095 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 TEAD2Q15562 447 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF77Q15935 545 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 AAK1Q2M2I8 961 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 PYCR3Q53H96 274 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 ARSIQ5FYB1 569 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 LY6G5CQ5SRR4 150 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 CPZQ66K79 652 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 SHQ1Q6PI26 577 aaKnown RBP9.36□□□□□ -0.91
NPHP3-209ENST00000493732 AGTRAPQ6RW13 159 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 DNAJC14Q6Y2X3 702 aaPredicted RBP9.36□□□□□ -0.91
NPHP3-209ENST00000493732 Q6ZVL8 140 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 KCTD8Q6ZWB6 473 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 TECPR1Q7Z6L1 1165 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 VRK3Q8IV63 474 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 ARL10Q8N8L6 244 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 WDR20Q8TBZ3 569 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 SCAMP4Q969E2 229 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 APIPQ96GX9 242 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF514Q96K75 400 aaPredicted RBP9.36□□□□□ -0.91
NPHP3-209ENST00000493732 RIOK2Q9BVS4 552 aaKnown RBP9.36□□□□□ -0.91
NPHP3-209ENST00000493732 SMG9Q9H0W8 520 aaKnown RBP9.36□□□□□ -0.91
NPHP3-209ENST00000493732 TOR3AQ9H497 397 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 IKZF5Q9H5V7 419 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 AASDHPPTQ9NRN7 309 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 THG1LQ9NWX6 298 aaKnown RBP9.36□□□□□ -0.91
NPHP3-209ENST00000493732 CD84Q9UIB8 345 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 BTNL2Q9UIR0 455 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 KCNE2Q9Y6J6 123 aa9.36□□□□□ -0.91
NPHP3-209ENST00000493732 MAGEB17A8MXT2 336 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 FPGTO14772 594 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 AREL1O15033 823 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SLC16A6O15403 523 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 DPM1O60762 260 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CLIC3O95833 236 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PRNPP04156 253 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 RHOP08100 348 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ELFN1P0C7U0 828 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PCSK6P29122 969 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 RYKP34925 604 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 HPCAL1P37235 193 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 DCTP40126 519 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CCR2P41597 374 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 PHC1P78364 1004 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 UBE3AQ05086 875 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 VMACQ2NL98 169 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 LRRC23Q53EV4 343 aaPredicted RBP9.35□□□□□ -0.91
NPHP3-209ENST00000493732 DOK6Q6PKX4 331 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SPESP1Q6UW49 350 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 RFLNAQ6ZTI6 216 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 TMEM26Q6ZUK4 368 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF765Q7L2R6 523 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 ARHGAP22Q7Z5H3 698 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 CAMKMTQ7Z624 323 aa9.35□□□□□ -0.91
NPHP3-209ENST00000493732 SLC22A15Q8IZD6 547 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms