RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TSPEARQ8WU66 669 aa19.65■□□□□ 0.74
RNF40-203ENST00000493683 HERVK_113Q902F9 699 aa19.65■□□□□ 0.74
RNF40-203ENST00000493683 GAL3ST4Q96RP7 486 aa19.65■□□□□ 0.74
RNF40-203ENST00000493683 PPEF2O14830 753 aa19.65■□□□□ 0.74
RNF40-203ENST00000493683 XRCC1P18887 633 aaPredicted RBP19.65■□□□□ 0.74
RNF40-203ENST00000493683 PLA2G16P53816 162 aa19.65■□□□□ 0.74
RNF40-203ENST00000493683 GPR22Q99680 433 aa19.65■□□□□ 0.74
RNF40-203ENST00000493683 UCK2Q9BZX2 261 aa19.65■□□□□ 0.74
RNF40-203ENST00000493683 LOC100130705A0A1B0GUX0 176 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 M0QX08 132 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 EPCAMP16422 314 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 CLIP4Q8N3C7 705 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 AVL9Q8NBF6 648 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 SLAIN1Q8ND83 568 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 NUS1Q96E22 293 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 MTERF1Q99551 399 aaKnown RBP19.64■□□□□ 0.74
RNF40-203ENST00000493683 SERINC1Q9NRX5 453 aa19.64■□□□□ 0.74
RNF40-203ENST00000493683 IFNA21P01568 189 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 GRIA1P42261 906 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 PHC1P78364 1004 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 CIR1Q86X95 450 aaPredicted RBP19.64■□□□□ 0.73
RNF40-203ENST00000493683 ZNF420Q8TAQ5 688 aaPredicted RBP19.64■□□□□ 0.73
RNF40-203ENST00000493683 PTPN18Q99952 460 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 CDC14AQ9UNH5 594 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 CARD8Q9Y2G2 431 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 A0A1W2PP18 115 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 AGRPO00253 132 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 FAM189A1O60320 539 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 COQ9O75208 318 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 BCAS2O75934 225 aaPredicted RBP19.64■□□□□ 0.73
RNF40-203ENST00000493683 LMO2P25791 158 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 C4orf46Q504U0 113 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 MARCH9Q86YJ5 346 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 ARL14EPQ8N8R7 260 aaPredicted RBP19.64■□□□□ 0.73
RNF40-203ENST00000493683 ZUFSPQ96AP4 578 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 CPNE2Q96FN4 548 aaPredicted RBP19.64■□□□□ 0.73
RNF40-203ENST00000493683 CDKN2AIPNLQ96HQ2 116 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 PYURFQ96I23 114 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 FAM129BQ96TA1 746 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 TMEM59LQ9UK28 342 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 CPNE3O75131 537 aaKnown RBP19.64■□□□□ 0.73
RNF40-203ENST00000493683 PGAM2P15259 253 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 SP140Q13342 867 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 SLBPQ14493 270 aaKnown RBP eCLIP19.64■□□□□ 0.73
RNF40-203ENST00000493683 OR6K6Q8NGW6 343 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 COQ8BQ96D53 544 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 NDC1Q9BTX1 674 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 SUV39H2Q9H5I1 410 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 POPDC3Q9HBV1 291 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 ZBTB26Q9HCK0 441 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 MKS1Q9NXB0 559 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 ALG5Q9Y673 324 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 MAU2Q9Y6X3 613 aa19.64■□□□□ 0.73
RNF40-203ENST00000493683 C5orf51A6NDU8 294 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 DNAJB5O75953 348 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 HLA-DQB2P05538 268 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 MAB21L1Q13394 359 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 BRAT1Q6PJG6 821 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 RBM23Q86U06 439 aaKnown RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 DMRTB1Q96MA1 342 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 ZNF317Q96PQ6 595 aaPredicted RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 GAS2L1Q99501 681 aaPredicted RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 DERL2Q9GZP9 239 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 WDR37Q9Y2I8 494 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 CLUP10909 449 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 CKMT2P17540 419 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 GSK3BP49841 420 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 NRG3P56975 720 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 CLEC20AQ6ZU45 233 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 ZC3HC1Q86WB0 502 aaKnown RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 ANKFN1Q8N957 763 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 KIF1AQ12756 1690 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 TPST2O60704 377 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 EIF2S3P41091 472 aaKnown RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 PRAMEF14Q5SWL7 426 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 PRAMEF13Q5VWM6 474 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 SLC8B1Q6J4K2 584 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 MTMR10Q9NXD2 777 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 ZNF487B1APH4 448 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 ITM2AO43736 263 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 DGKZQ13574 1117 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 GANABQ14697 944 aaKnown RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 KLHL26Q53HC5 615 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 C10orf62Q5T681 223 aaPredicted RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 IFNLR1Q8IU57 520 aaPredicted RBP19.63■□□□□ 0.73
RNF40-203ENST00000493683 NXPE1Q8N323 547 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 SLC38A3Q99624 504 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 TM9SF3Q9HD45 589 aa19.63■□□□□ 0.73
RNF40-203ENST00000493683 MAPK3P27361 379 aaPredicted RBP19.62■□□□□ 0.73
RNF40-203ENST00000493683 ERP29P30040 261 aaKnown RBP19.62■□□□□ 0.73
RNF40-203ENST00000493683 EVX2Q03828 476 aa19.62■□□□□ 0.73
RNF40-203ENST00000493683 ZNF829Q3KNS6 432 aaPredicted RBP19.62■□□□□ 0.73
RNF40-203ENST00000493683 ZNF773Q6PK81 442 aa19.62■□□□□ 0.73
RNF40-203ENST00000493683 XKRXQ6PP77 449 aa19.62■□□□□ 0.73
RNF40-203ENST00000493683 ZNF782Q6ZMW2 699 aaPredicted RBP19.62■□□□□ 0.73
RNF40-203ENST00000493683 SPERTQ8NA61 448 aa19.62■□□□□ 0.73
RNF40-203ENST00000493683 CCM2Q9BSQ5 444 aa19.62■□□□□ 0.73
RNF40-203ENST00000493683 HSD3B7Q9H2F3 369 aa19.62■□□□□ 0.73
RNF40-203ENST00000493683 TRBC2A0A5B9 178 aa19.62■□□□□ 0.73
RNF40-203ENST00000493683 INMTO95050 263 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms