RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SRPX2O60687 465 aaPredicted RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 ONECUT2O95948 504 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 ALPPP05187 535 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 MMP11P24347 488 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 ITGA3P26006 1051 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 ATP5DP30049 168 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 COILP38432 576 aaPredicted RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 ADARP55265 1226 aaKnown RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 CTBP1Q13363 440 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 THOC5Q13769 683 aaKnown RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 FAM214AQ32MH5 1076 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 DENND6AQ8IWF6 608 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 RASGEF1CQ8N431 466 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 C19orf60Q96EN9 201 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 PBKQ96KB5 322 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 SPSB2Q99619 263 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 SLC30A3Q99726 388 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 DPH7Q9BTV6 452 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 WDR54Q9H977 334 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 ZBTB20Q9HC78 741 aaPredicted RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 XAB2Q9HCS7 855 aaKnown RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 SLC6A20Q9NP91 592 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 FBXO6Q9NRD1 293 aaPredicted RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 INTS10Q9NVR2 710 aaKnown RBP16.5■□□□□ 0.23
SGMS1-204ENST00000492601 VPS9D1Q9Y2B5 631 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 KLK4Q9Y5K2 254 aa16.5■□□□□ 0.23
SGMS1-204ENST00000492601 DIDO1Q9BTC0 2240 aaKnown RBP16.49■□□□□ 0.23
SGMS1-204ENST00000492601 PSIP1O75475 530 aaKnown RBP16.49■□□□□ 0.23
SGMS1-204ENST00000492601 USP1O94782 785 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 AGFG2O95081 481 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 ALBP02768 609 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 CMPK1P30085 196 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 RPA3P35244 121 aaPredicted RBP16.49■□□□□ 0.23
SGMS1-204ENST00000492601 CLCN7P51798 805 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 CUL1Q13616 776 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 FHL5Q5TD97 284 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
SGMS1-204ENST00000492601 RNF44Q7L0R7 432 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 REXO1L1PQ8IX06 675 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 MCUQ8NE86 351 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 SMPDL3AQ92484 453 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 SERPINB12Q96P63 405 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 PKP4Q99569 1192 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 SLC26A1Q9H2B4 701 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 ABCF3Q9NUQ8 709 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 JRKLQ9Y4A0 524 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 HS3ST3B1Q9Y662 390 aa16.49■□□□□ 0.23
SGMS1-204ENST00000492601 MAGEB16A2A368 324 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 OR2A25A4D2G3 310 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 TCP11X1B4DZS4 312 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 MYO1CO00159 1063 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 SOCS6O14544 535 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 KIF5CO60282 957 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 CATP04040 527 aaKnown RBP16.48■□□□□ 0.23
SGMS1-204ENST00000492601 ERVK-10P10266 1014 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 ERGP11308 486 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 MLNP12872 115 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 GP1BBP13224 206 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 AIMP2Q13155 320 aaKnown RBP16.48■□□□□ 0.23
SGMS1-204ENST00000492601 MRPL49Q13405 166 aaKnown RBP16.48■□□□□ 0.23
SGMS1-204ENST00000492601 RBBP7Q16576 425 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 FBXO42Q6P3S6 717 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 PRSS58Q8IYP2 241 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 CISD2Q8N5K1 135 aaKnown RBP16.48■□□□□ 0.23
SGMS1-204ENST00000492601 PPFIBP2Q8ND30 876 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 GIMAP7Q8NHV1 300 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 PSMG3-AS1Q96PY0 264 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 ZFYVE21Q9BQ24 234 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 CCDC68Q9H2F9 335 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 LRRC4CQ9HCJ2 640 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 ZNF304Q9HCX3 659 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 MRPS30Q9NP92 439 aaKnown RBP16.48■□□□□ 0.23
SGMS1-204ENST00000492601 ENAMQ9NRM1 1142 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 TAC3Q9UHF0 121 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 B3GNT3Q9Y2A9 372 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 MAD1L1Q9Y6D9 718 aa16.48■□□□□ 0.23
SGMS1-204ENST00000492601 ZCWPW2A0A1B0GU75 182 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 H0YGG7 62 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 PGRMC1O00264 195 aaKnown RBP16.47■□□□□ 0.23
SGMS1-204ENST00000492601 KLHL41O60662 606 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 IPO13O94829 963 aaKnown RBP16.47■□□□□ 0.23
SGMS1-204ENST00000492601 SYF2O95926 243 aaKnown RBP16.47■□□□□ 0.23
SGMS1-204ENST00000492601 SLC1A2P43004 574 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 PNLIPRP1P54315 467 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 SOX8P57073 446 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 ARF3P61204 181 aaPredicted RBP16.47■□□□□ 0.23
SGMS1-204ENST00000492601 CYP1B1Q16678 543 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 EIF2S3LQ2VIR3 472 aaKnown RBP16.47■□□□□ 0.23
SGMS1-204ENST00000492601 TTLL9Q3SXZ7 439 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 PRAMEF13Q5VWM6 474 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 ARMC3Q5W041 872 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 ZNF549Q6P9A3 640 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 KIRREL2Q6UWL6 708 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 IGFL3Q6UXB1 125 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 PARP9Q8IXQ6 854 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 IQCKQ8N0W5 287 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 AGGF1Q8N302 714 aaeCLIP16.47■□□□□ 0.23
SGMS1-204ENST00000492601 ZADH2Q8N4Q0 377 aa16.47■□□□□ 0.23
SGMS1-204ENST00000492601 COG1Q8WTW3 980 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms