RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ADRA1DP25100 572 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 OTX2P32243 289 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 RPL9P32969 192 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 MC5RP33032 325 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 HSD17B3P37058 310 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 PBX3P40426 434 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ADARP55265 1226 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 HUNKP57058 714 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 CYP4F2P78329 520 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 TNFRSF17Q02223 184 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 MTAPQ13126 283 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 IL11RAQ14626 422 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ACOX1Q15067 660 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 NCF4Q15080 339 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 UGP2Q16851 508 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ASTE1Q2TB18 679 aaPredicted RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 TBRG1Q3YBR2 411 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 SLC9C1Q4G0N8 1177 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 FBXO43Q4G163 708 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 LRRC24Q50LG9 513 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ZNF789Q5FWF6 425 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ZNF766Q5HY98 468 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 PCID2Q5JVF3 399 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 DENND2CQ68D51 928 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 MOXD1Q6UVY6 613 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 KIRREL2Q6UWL6 708 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 NAPRTQ6XQN6 538 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 C15orf39Q6ZRI6 1047 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 RRM2BQ7LG56 351 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 TRPM8Q7Z2W7 1104 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 AMIGO2Q86SJ2 522 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 IQCHQ86VS3 1027 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ZNF573Q86YE8 665 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.66□□□□□ -1.66
RTN4-215ENST00000491592 SETD9Q8NE22 299 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 B4GALNT2Q8NHY0 566 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ACTRT1Q8TDG2 376 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 BCL2L2Q92843 193 aaPredicted RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 SARAFQ96BY9 339 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 PGM2Q96G03 612 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 MASTLQ96GX5 879 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 PRR11Q96HE9 360 aaPredicted RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 C5orf34Q96MH7 638 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 INPP4AQ96PE3 977 aaPredicted RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 ZNF317Q96PQ6 595 aaPredicted RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 PPP1R10Q96QC0 940 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 KRT12Q99456 494 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 TIMP4Q99727 224 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 MACROD1Q9BQ69 325 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 THAP7Q9BT49 309 aaPredicted RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 TMEM109Q9BVC6 243 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 PKIBQ9C010 78 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 FAM192AQ9GZU8 254 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 ZNF350Q9GZX5 532 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 RAB17Q9H0T7 212 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 BLZF1Q9H2G9 400 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 SYNPO2LQ9H987 977 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 AKIRIN1Q9H9L7 192 aaPredicted RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 KIF9Q9HAQ2 790 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 WDR6Q9NNW5 1121 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 TUFT1Q9NNX1 390 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 SDHAF3Q9NRP4 125 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 LIN7CQ9NUP9 197 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 NUDT15Q9NV35 164 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 DNAJC17Q9NVM6 304 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 RPL26L1Q9UNX3 145 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 MRPS2Q9Y399 296 aaKnown RBP4.66□□□□□ -1.66
RTN4-215ENST00000491592 INSL6Q9Y581 213 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 LIPGQ9Y5X9 500 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 TEX264Q9Y6I9 313 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 C1orf167Q5SNV9 1468 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 PXDNQ92626 1479 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 TJP1Q07157 1748 aa4.66□□□□□ -1.66
RTN4-215ENST00000491592 A0A087WZY1 265 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 PVALEFA0A1B0GWK0 134 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 GOLGA8OA6NCC3 632 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 TRIM49BA6NDI0 452 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 SH2D7A6NKC9 451 aaPredicted RBP4.65□□□□□ -1.67
RTN4-215ENST00000491592 GOLGA8NF8WBI6 632 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 F8WDY8 70 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 PRRG1O14668 218 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 SLC30A4O14863 429 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 OGTO15294 1046 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 EIF3DO15371 548 aaKnown RBP eCLIP4.65□□□□□ -1.67
RTN4-215ENST00000491592 DHHO43323 396 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 RAD51CO43502 376 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 TLX2O43763 284 aaPredicted RBP4.65□□□□□ -1.67
RTN4-215ENST00000491592 KLRC4O43908 158 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 TRIM3O75382 744 aaPredicted RBP4.65□□□□□ -1.67
RTN4-215ENST00000491592 WBP4O75554 376 aaKnown RBP4.65□□□□□ -1.67
RTN4-215ENST00000491592 PRDM1O75626 825 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 KLHL2O95198 593 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 ECDO95905 644 aaPredicted RBP4.65□□□□□ -1.67
RTN4-215ENST00000491592 CH25HO95992 272 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 RPSAP08865 295 aaKnown RBP4.65□□□□□ -1.67
RTN4-215ENST00000491592 GABRB1P18505 474 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 GPD1P21695 349 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 ADORA1P30542 326 aa4.65□□□□□ -1.67
RTN4-215ENST00000491592 CLK3P49761 638 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms