RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 LONRF2Q1L5Z9 754 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 HSP90B2PQ58FF3 399 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 TAF3Q5VWG9 929 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 C11orf87Q6NUJ2 197 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 ZNF585AQ6P3V2 769 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 POMZP3Q6PJE2 187 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 CNSTQ6PJW8 725 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 ABRAXAS1Q6UWZ7 409 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 COX15Q7KZN9 410 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 HSD11B1LQ7Z5J1 315 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 GOLGA6L1Q8N7Z2 621 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 NOA1Q8NC60 698 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 SLC35G2Q8TBE7 412 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 KAT2AQ92830 837 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 SEMA4DQ92854 862 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 MRPL24Q96A35 216 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 KIAA1191Q96A73 305 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 CXorf40BQ96DE9 158 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 EXOC2Q96KP1 924 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 SYT3Q9BQG1 590 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 ANGPTL4Q9BY76 406 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 ISCUQ9H1K1 167 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 RASSF4Q9H2L5 321 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 SLCO5A1Q9H2Y9 848 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 CISHQ9NSE2 258 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 KLC4Q9NSK0 619 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 DDIT4Q9NX09 232 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 ANKRD10Q9NXR5 420 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 COX16Q9P0S2 106 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 B4GALT6Q9UBX8 382 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 NXT1Q9UKK6 140 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 SNX10Q9Y5X0 201 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 KIAA1549Q9HCM3 1950 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 HSPB2A8KAH6 182 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 PDZK1P1A8MUH7 402 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 CCDC188H7C350 402 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 CASKO14936 926 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SART1O43290 800 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 NME2P1O60361 137 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 OR2B3O76000 313 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 NEURL1O76050 574 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SEC31AO94979 1220 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 HEXIM1O94992 359 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 ASMTLO95671 621 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 MYBL1P10243 752 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 NME2P22392 152 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 MLF1P58340 268 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 CBX1P83916 185 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 LOXL1Q08397 574 aaPredicted RBP7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SF3B4Q15427 424 aaKnown RBP eCLIP7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 HSPB2Q16082 182 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SLC5A12Q1EHB4 618 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 DENND2CQ68D51 928 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 FAM166AQ6J272 317 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SLC25A25Q6KCM7 469 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 C11orf63Q6NUN7 778 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 CDHR3Q6ZTQ4 885 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 Q6ZVL8 140 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SLFN11Q7Z7L1 901 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 NOP9Q86U38 636 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 OOSP2Q86WS3 158 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 DNAAF5Q86Y56 855 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 IFT20Q8IY31 132 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 TTC39CQ8N584 583 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 LRRC57Q8N9N7 239 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 POGLUT1Q8NBL1 392 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 NAXEQ8NCW5 288 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 GPR150Q8NGU9 434 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 ACTRT1Q8TDG2 376 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SLC20A1Q8WUM9 679 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 ZNF653Q96CK0 615 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 HSFY1Q96LI6 401 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 KREMEN1Q96MU8 473 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 TUBGCP5Q96RT8 1024 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 SYT11Q9BT88 431 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 ZCCHC2Q9C0B9 1178 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 THAP2Q9H0W7 228 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 TXLNGQ9NUQ3 528 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 ZNF446Q9NWS9 450 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 UVRAGQ9P2Y5 699 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 LHX3Q9UBR4 397 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 CTSFQ9UBX1 484 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 PCDHB4Q9Y5E5 795 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 ALPK2Q86TB3 2170 aa7.05□□□□□ -1.28
EXOSC3-206ENST00000489414 HERC1Q15751 4861 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 IGHV1-45A0A0A0MS14 117 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 VSTM2BA6NLU5 285 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 ZSCAN9O15535 394 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 SPOPO43791 374 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 PDE9AO76083 593 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 LRIG2O94898 1065 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 MMEP08473 750 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 PIM1P11309 404 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CDH3P22223 829 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 RPL10P27635 214 aaKnown RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 NSFP46459 744 aaKnown RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 CARSP49589 748 aaKnown RBP7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 EFNA3P52797 238 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 VSNL1P62760 191 aa7.04□□□□□ -1.28
EXOSC3-206ENST00000489414 AP2B1P63010 937 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms