RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 NAPRTQ6XQN6 538 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 CHSY3Q70JA7 882 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 CLYBLQ8N0X4 340 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 MLKLQ8NB16 471 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 FAM57AQ8TBR7 257 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 FAM71BQ8TC56 605 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF398Q8TD17 642 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 RND1Q92730 232 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 TFGQ92734 400 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 SRPK1Q96SB4 655 aaKnown RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 SLC25A51Q9H1U9 297 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF304Q9HCX3 659 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 UBP1Q9NZI7 540 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 IL1RAPL1Q9NZN1 696 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 STOX2Q9P2F5 926 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF282Q9UDV7 671 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-212ENST00000489378 PLAGL1Q9UM63 463 aa8.71□□□□□ -1.02
SSBP1-212ENST00000489378 PHF3Q92576 2039 aaKnown RBP8.7□□□□□ -1.02
SSBP1-212ENST00000489378 MPDZO75970 2070 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 IGLV3-12A0A075B6K2 115 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 FITM1A5D6W6 292 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 FAM171A2A8MVW0 826 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 IDSB3KWA1 339 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 CD151P48509 253 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 PRLHRP49683 370 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 EFNA3P52797 238 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 PPIDQ08752 370 aaKnown RBP8.7□□□□□ -1.02
SSBP1-212ENST00000489378 OR1C1Q15619 314 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 TMEM211Q6ICI0 200 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 CCDC70Q6NSX1 233 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 GALNTL5Q7Z4T8 443 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 PHC2Q8IXK0 858 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 CIARTQ8N365 385 aaPredicted RBP8.7□□□□□ -1.02
SSBP1-212ENST00000489378 CPSF7Q8N684 471 aaKnown RBP8.7□□□□□ -1.02
SSBP1-212ENST00000489378 PQLC3Q8N755 202 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 LMNTD1Q8N9Z9 388 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 GOT1L1Q8NHS2 421 aaPredicted RBP8.7□□□□□ -1.02
SSBP1-212ENST00000489378 SEC16BQ96JE7 1060 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 BTBD6Q96KE9 485 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 IMMP1LQ96LU5 166 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF285Q96NJ3 590 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF700Q9H0M5 742 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 TRABDQ9H4I3 376 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.7□□□□□ -1.02
SSBP1-212ENST00000489378 MYO1AQ9UBC5 1043 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 TEKT2Q9UIF3 430 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 GNPTGQ9UJJ9 305 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 EDARQ9UNE0 448 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
SSBP1-212ENST00000489378 ARID1AO14497 2285 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 LOC102723996A0A087X1L8 192 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 A0A1B0GTH9 108 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 FTLP02792 175 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-212ENST00000489378 RAF1P04049 648 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF24P17028 368 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 PTGS2P35354 604 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 NUP107P57740 925 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 PMPCAQ10713 525 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 FASTKQ14296 549 aaKnown RBP8.69□□□□□ -1.02
SSBP1-212ENST00000489378 SLC14A2Q15849 920 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 SIRPB2Q5JXA9 342 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 ACER2Q5QJU3 275 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 GLT6D1Q7Z4J2 308 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 SLC25A41Q8N5S1 370 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 GOLGA6L1Q8N7Z2 621 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 TTC29Q8NA56 475 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-212ENST00000489378 BLOC1S5Q8TDH9 187 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 COX4I2Q96KJ9 171 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 NPAS2Q99743 824 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 SELENOSQ9BQE4 189 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 OR6C2Q9NZP2 312 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 MKL2Q9ULH7 1088 aa8.69□□□□□ -1.02
SSBP1-212ENST00000489378 TDRKHQ9Y2W6 561 aaKnown RBP8.69□□□□□ -1.02
SSBP1-212ENST00000489378 HYKKA2RU49 373 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 RNF212BA8MTL3 300 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 FBLP22087 321 aaKnown RBP8.68□□□□□ -1.02
SSBP1-212ENST00000489378 EEF1GP26641 437 aaKnown RBP8.68□□□□□ -1.02
SSBP1-212ENST00000489378 VSX2P58304 361 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-212ENST00000489378 KIR2DS3Q14952 304 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 KRT31Q15323 416 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 FAM214AQ32MH5 1076 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 DPCR1Q3MIW9 517 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 TCTE1Q5JU00 501 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 WASHC2DQ5SRD0 308 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 ARSKQ6UWY0 536 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 IRF2BP2Q7Z5L9 587 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 CPNE8Q86YQ8 564 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 C2orf73Q8N5S3 287 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-212ENST00000489378 TMEM178AQ8NBL3 297 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 NEK11Q8NG66 645 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 DCUN1D1Q96GG9 259 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 UTP23Q9BRU9 249 aaKnown RBP8.68□□□□□ -1.02
SSBP1-212ENST00000489378 ASB8Q9H765 288 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 GLOD4Q9HC38 313 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 CRIM1Q9NZV1 1036 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 ASF1AQ9Y294 204 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 PKP3Q9Y446 797 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms