RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SLCO2A1Q92959 643 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 ZUFSPQ96AP4 578 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 NAPGQ99747 312 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-206ENST00000489142 EBNA1BP2Q99848 306 aaKnown RBP13.42□□□□□ -0.26
VTI1A-206ENST00000489142 WDR83Q9BRX9 315 aaKnown RBP13.42□□□□□ -0.26
VTI1A-206ENST00000489142 AARSD1Q9BTE6 412 aaKnown RBP13.42□□□□□ -0.26
VTI1A-206ENST00000489142 DHRS4Q9BTZ2 278 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 NUDT9Q9BW91 350 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 TRIM31Q9BZY9 425 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 MRPS30Q9NP92 439 aaKnown RBP13.42□□□□□ -0.26
VTI1A-206ENST00000489142 FAM114A2Q9NRY5 505 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 ZC3H7BQ9UGR2 993 aaKnown RBP13.42□□□□□ -0.26
VTI1A-206ENST00000489142 CHMP2BQ9UQN3 213 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 PLAAQ9Y263 795 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 DHRS7Q9Y394 339 aa13.42□□□□□ -0.26
VTI1A-206ENST00000489142 SETXQ7Z333 2677 aaKnown RBP13.41□□□□□ -0.26
VTI1A-206ENST00000489142 IGKV1-8A0A0C4DH67 115 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 TARM1B6A8C7 271 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 DSCR3O14972 297 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 TTI1O43156 1089 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 ALOX12BO75342 701 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 VPS26AO75436 327 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 STATHP02808 62 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 GABRB3P28472 473 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 ELK3P41970 407 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 CARSP49589 748 aaKnown RBP13.41□□□□□ -0.26
VTI1A-206ENST00000489142 CDKN2DP55273 166 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 DR1Q01658 176 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 GRM7Q14831 915 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 PAPD7Q5XG87 772 aaKnown RBP13.41□□□□□ -0.26
VTI1A-206ENST00000489142 CYHR1Q6ZMK1 362 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 NEK10Q6ZWH5 1172 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 RNF44Q7L0R7 432 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 PPP1R32Q7Z5V6 425 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 C2CD4AQ8NCU7 369 aaPredicted RBP13.41□□□□□ -0.26
VTI1A-206ENST00000489142 OR2Y1Q8NGV0 311 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 ZNF480Q8WV37 535 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 ASB11Q8WXH4 323 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 SMPDL3AQ92484 453 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 C17orf62Q9BQA9 187 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 MFRPQ9BY79 579 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 SOX17Q9H6I2 414 aaPredicted RBP13.41□□□□□ -0.26
VTI1A-206ENST00000489142 PLAC1Q9HBJ0 212 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 PPANQ9NQ55 473 aaKnown RBP13.41□□□□□ -0.26
VTI1A-206ENST00000489142 LUZP4Q9P127 313 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 CTSFQ9UBX1 484 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 ADAMTS6Q9UKP5 1117 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
VTI1A-206ENST00000489142 HYKKA2RU49 373 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 OR2A25A4D2G3 310 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 H0YGG7 62 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 SMAPO00193 183 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 FFAR3O14843 346 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 GPR42O15529 346 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 FKBP9O95302 570 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 MPC1LP0DKB6 136 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ITGA8P53708 1063 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ARSFP54793 590 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ARF3P61204 181 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-206ENST00000489142 SSPNQ14714 243 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 TCTE1Q5JU00 501 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 SPANXN3Q5MJ09 141 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ICE2Q659A1 982 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 FBXO42Q6P3S6 717 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 TRMT10BQ6PF06 316 aaKnown RBP13.4□□□□□ -0.26
VTI1A-206ENST00000489142 UBE2R2Q712K3 238 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-206ENST00000489142 PCGF5Q86SE9 256 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 PLD3Q8IV08 490 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ANKMY2Q8IV38 441 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 LMNTD2Q8IXW0 634 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-206ENST00000489142 EEF1AKMT1Q8WVE0 214 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ZFYVE21Q9BQ24 234 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 MESP1Q9BRJ9 268 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 CUEDC1Q9NWM3 386 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-206ENST00000489142 P4HTMQ9NXG6 502 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 TRMT6Q9UJA5 497 aaKnown RBP13.4□□□□□ -0.26
VTI1A-206ENST00000489142 KLK4Q9Y5K2 254 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 NBASA2RRP1 2371 aa13.4□□□□□ -0.26
VTI1A-206ENST00000489142 ASH1LQ9NR48 2969 aaKnown RBP13.4□□□□□ -0.26
VTI1A-206ENST00000489142 E7ENX8 843 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 GFYI3L273 518 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 CEACAM4O75871 244 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 AHSGP02765 367 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 FOXK1P85037 733 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 TAP2Q03519 686 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 MORF4L2Q15014 288 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 NKG7Q16617 165 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 HKDC1Q2TB90 917 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 THEMIS2Q5TEJ8 643 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 HIBCHQ6NVY1 386 aaPredicted RBP13.39□□□□□ -0.27
VTI1A-206ENST00000489142 PAQR3Q6TCH7 311 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 MED25Q71SY5 747 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 ADCK2Q7Z695 626 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 PAQR7Q86WK9 346 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 PRSS58Q8IYP2 241 aa13.39□□□□□ -0.27
VTI1A-206ENST00000489142 TMEM102Q8N9M5 508 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms