RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 A0A1W2PPV9 198 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 CDC14CA4D256 554 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 TERTO14746 1132 aaKnown RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 SRPX2O60687 465 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 PIM1P11309 404 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 ALAS2P22557 587 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 FDXRP22570 491 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 RORAP35398 523 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 GRM7Q14831 915 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 DEFB109BQ30KR1 87 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 FAM214AQ32MH5 1076 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 PTCHD3Q3KNS1 767 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 YOD1Q5VVQ6 348 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 RHBDD2Q6NTF9 364 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 SYVN1Q86TM6 617 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 ZC3HC1Q86WB0 502 aaKnown RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 NKAPQ8N5F7 415 aaKnown RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 ZNF480Q8WV37 535 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 MED8Q96G25 268 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 NLNQ9BYT8 704 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 PCBD2Q9H0N5 130 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 RHOJQ9H4E5 214 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 AKIRIN1Q9H9L7 192 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 MTRF1LQ9UGC7 380 aaKnown RBP13.71□□□□□ -0.21
BRCA1-218ENST00000489037 NDOR1Q9UHB4 597 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 TAC3Q9UHF0 121 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 SNX7Q9UNH6 387 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 KLK4Q9Y5K2 254 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 FER1L5A0AVI2 2057 aa13.71□□□□□ -0.21
BRCA1-218ENST00000489037 A0A0J9YVX5 310 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 E7ENX8 843 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 HCRTR1O43613 425 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 CCND1P24385 295 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 MAGEA4P43358 317 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 DCDP81605 110 aaKnown RBP13.7□□□□□ -0.22
BRCA1-218ENST00000489037 TIAL1Q01085 375 aaKnown RBP eCLIP13.7□□□□□ -0.22
BRCA1-218ENST00000489037 GUCY2DQ02846 1103 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 TAP2Q03519 686 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 PRDX1Q06830 199 aaKnown RBP13.7□□□□□ -0.22
BRCA1-218ENST00000489037 C19orf57Q0VDD7 668 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 LY6DQ14210 128 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 LINC00303Q3SY05 128 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 C1orf189Q5VU69 101 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 ICE2Q659A1 982 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 ZNF517Q6ZMY9 492 aaPredicted RBP13.7□□□□□ -0.22
BRCA1-218ENST00000489037 CYS1Q717R9 158 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 ADCK2Q7Z695 626 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 CTAGE3PQ8IX95 158 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 MMGT1Q8N4V1 131 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 PPFIBP2Q8ND30 876 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 APOBEC4Q8WW27 367 aaKnown RBP13.7□□□□□ -0.22
BRCA1-218ENST00000489037 TSPAN17Q96FV3 270 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 CPNE1Q99829 537 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 DHRS4Q9BTZ2 278 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 ADNPQ9H2P0 1102 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 CCDC177Q9NQR7 707 aaPredicted RBP13.7□□□□□ -0.22
BRCA1-218ENST00000489037 IFT80Q9P2H3 777 aaPredicted RBP13.7□□□□□ -0.22
BRCA1-218ENST00000489037 PDE10AQ9Y233 779 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 PSAT1Q9Y617 370 aa13.7□□□□□ -0.22
BRCA1-218ENST00000489037 ENO2P09104 434 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 HRH2P25021 359 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 IMPA1P29218 277 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 STX2P32856 288 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 AP1S2P56377 157 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 VSX2P58304 361 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 POU4F1Q01851 419 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 MLIPQ5VWP3 458 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 PCSK4Q6UW60 755 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 TTLL10Q6ZVT0 673 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 CEP112Q8N8E3 955 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 ENDOVQ8N8Q3 282 aaKnown RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 ATL1Q8WXF7 558 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 THAP4Q8WY91 577 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 RERGQ96A58 199 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 ALKBH8Q96BT7 664 aaKnown RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 PDLIM5Q96HC4 596 aaKnown RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 OLFM1Q99784 485 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 ZFYVE21Q9BQ24 234 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 TSPYL1Q9H0U9 437 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 ARL15Q9NXU5 204 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 STOX2Q9P2F5 926 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 DHCR7Q9UBM7 475 aaKnown RBP13.69□□□□□ -0.22
BRCA1-218ENST00000489037 ADAMTS6Q9UKP5 1117 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 MAN2B2Q9Y2E5 1009 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 ATRXP46100 2492 aa13.69□□□□□ -0.22
BRCA1-218ENST00000489037 PIEZO2Q9H5I5 2752 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 TCRBV9S1A1TA0A576 114 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 ESYT3A0FGR9 886 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 OR2A25A4D2G3 310 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 H3BMH7 237 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 CTSVO60911 334 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 EIF2S1P05198 315 aaKnown RBP13.68□□□□□ -0.22
BRCA1-218ENST00000489037 FAM87AP0C7U9 286 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 SPRP35270 261 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-218ENST00000489037 GP5P40197 560 aa13.68□□□□□ -0.22
BRCA1-218ENST00000489037 POLE2P56282 527 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms