RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 LEXMQ3ZCV2 418 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 PIGGQ5H8A4 983 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 AP1ARQ63HQ0 302 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 TRIM69Q86WT6 500 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 ST13P4Q8IZP2 240 aaPredicted RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 VPS33AQ96AX1 596 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 SGPP1Q9BX95 441 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 LRTM1Q9HBL6 345 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 ZIM2Q9NZV7 527 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 MOSPD1Q9UJG1 213 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 CA14Q9ULX7 337 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 ASPDHA6ND91 283 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 CACNB4O00305 520 aaPredicted RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 SEC22BO75396 215 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 RSL1D1O76021 490 aaKnown RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 VARSP26640 1264 aaKnown RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 PEX2P28328 305 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 THOP1P52888 689 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 PNLIPRP1P54315 467 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 PSME3P61289 254 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 MED21Q13503 144 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 TSTA3Q13630 321 aaPredicted RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 TPRG1LQ5T0D9 272 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 CAPN13Q6MZZ7 669 aaPredicted RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 C8orf82Q6P1X6 216 aaPredicted RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 ZNF852Q6ZMS4 543 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 RNF148Q8N7C7 305 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 OR2T34Q8NGX1 318 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 OR5K2Q8NHB8 316 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 RAD51AP1Q96B01 352 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 BMFQ96LC9 184 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 SLC39A3Q9BRY0 314 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 CENPKQ9BS16 269 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 OSGEPL1Q9H4B0 414 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 TDRKHQ9Y2W6 561 aaKnown RBP19.57■□□□□ 0.72
NECAB3-213ENST00000488489 PRR19A6NJB7 356 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 MAN2B1O00754 1011 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 MSX2P35548 267 aaPredicted RBP19.56■□□□□ 0.72
NECAB3-213ENST00000488489 AQP4P55087 323 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 SFSWAPQ12872 951 aaKnown RBP19.56■□□□□ 0.72
NECAB3-213ENST00000488489 PTGR1Q14914 329 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 LRRC36Q1X8D7 754 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 LIN52Q52LA3 116 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 ADNP2Q6IQ32 1131 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 DUS1LQ6P1R4 473 aaKnown RBP19.56■□□□□ 0.72
NECAB3-213ENST00000488489 SLCO4C1Q6ZQN7 724 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 DCUN1D3Q8IWE4 304 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 C2orf73Q8N5S3 287 aaPredicted RBP19.56■□□□□ 0.72
NECAB3-213ENST00000488489 WDR20Q8TBZ3 569 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 SCARF2Q96GP6 870 aaPredicted RBP19.56■□□□□ 0.72
NECAB3-213ENST00000488489 TIMM29Q9BSF4 260 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 RMI1Q9H9A7 625 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 C1orf109Q9NX04 203 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 USP36Q9P275 1121 aaKnown RBP19.56■□□□□ 0.72
NECAB3-213ENST00000488489 ACSL5Q9ULC5 683 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 DUSP12Q9UNI6 340 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 NDUFAF1Q9Y375 327 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 KCNE2Q9Y6J6 123 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 PCM1Q15154 2024 aa19.56■□□□□ 0.72
NECAB3-213ENST00000488489 KANSL1LA0AUZ9 987 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 BBIP1A8MTZ0 92 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 H3BNX3 289 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 PEX1O43933 1283 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 FOSL2P15408 326 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 POLR2JP52435 117 aaKnown RBP19.55■□□□□ 0.72
NECAB3-213ENST00000488489 MLLT1Q03111 559 aaPredicted RBP19.55■□□□□ 0.72
NECAB3-213ENST00000488489 E2F2Q14209 437 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 GAS6Q14393 721 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 ZNF423Q2M1K9 1284 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 CATSPEREQ5SY80 951 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 ZFAND4Q86XD8 727 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 GALNT13Q8IUC8 556 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 PGBD3Q8N328 593 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 GUCD1Q96NT3 240 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 GPSM3Q9Y4H4 160 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 A0A1W2PP18 115 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 KLHL33A6NCF5 533 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 LRRC72A6NJI9 287 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 C10orf142B7Z368 130 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 IFRD1O00458 451 aaPredicted RBP19.55■□□□□ 0.72
NECAB3-213ENST00000488489 SLC35G4P0C7Q5 338 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 YBX1P67809 324 aaKnown RBP19.55■□□□□ 0.72
NECAB3-213ENST00000488489 SMU1Q2TAY7 513 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 GRHL2Q6ISB3 625 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 HOMEZQ8IX15 550 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 MAGEB10Q96LZ2 347 aaPredicted RBP19.55■□□□□ 0.72
NECAB3-213ENST00000488489 INSM2Q96T92 566 aaPredicted RBP19.55■□□□□ 0.72
NECAB3-213ENST00000488489 MTERF1Q99551 399 aaKnown RBP19.55■□□□□ 0.72
NECAB3-213ENST00000488489 MENTQ9BUN1 341 aa19.55■□□□□ 0.72
NECAB3-213ENST00000488489 GON4LQ3T8J9 2241 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 ANGPT2O15123 496 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 KELP23276 732 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 CASP2P42575 452 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 KCNK10P57789 538 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 TRIP10Q15642 601 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 HACD2Q6Y1H2 254 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 TMPRSS11BQ86T26 416 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 TSPEARQ8WU66 669 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 NCSTNQ92542 709 aa19.54■□□□□ 0.72
NECAB3-213ENST00000488489 BTBD9Q96Q07 612 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms