RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 MMP20O60882 483 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 DNAJB5O75953 348 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 LDLRP01130 860 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 ZNF30P17039 623 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 ZNF460Q14592 562 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 ACOX1Q15067 660 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 CYP51A1Q16850 503 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 FBXO43Q4G163 708 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 PIP5KL1Q5T9C9 394 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 ZNF776Q68DI1 518 aaPredicted RBP13.34□□□□□ -0.27
COPS7B-221ENST00000488111 CYHR1Q6ZMK1 362 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 TRMT11Q7Z4G4 463 aaKnown RBP13.34□□□□□ -0.27
COPS7B-221ENST00000488111 R3HCC1LQ7Z5L2 792 aaKnown RBP13.34□□□□□ -0.27
COPS7B-221ENST00000488111 GABPB2Q8TAK5 448 aaPredicted RBP13.34□□□□□ -0.27
COPS7B-221ENST00000488111 ELMO2Q96JJ3 720 aa13.34□□□□□ -0.27
COPS7B-221ENST00000488111 FAM95CA0A1B0GW59 222 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 A8MU76 341 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 AREL1O15033 823 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 NDUFS3O75489 264 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 NTRK1P04629 796 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 UMPSP11172 480 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 CHRNB1P11230 501 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 BMP4P12644 408 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 SLC6A2P23975 617 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 GABARAPL2P60520 117 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 STX1BP61266 288 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 CACNG1Q06432 222 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 UBXN2BQ14CS0 331 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 ATAD3BQ5T9A4 648 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 NEK10Q6ZWH5 1172 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 SLCO6A1Q86UG4 719 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 PTRH1Q86Y79 214 aaKnown RBP13.33□□□□□ -0.28
COPS7B-221ENST00000488111 CEP97Q8IW35 865 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 SIX5Q8N196 739 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 CBARPQ8N350 705 aaPredicted RBP13.33□□□□□ -0.28
COPS7B-221ENST00000488111 SGCDQ92629 289 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 HDAC2Q92769 488 aaKnown RBP13.33□□□□□ -0.28
COPS7B-221ENST00000488111 MSANTD3Q96H12 275 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 SLC30A3Q99726 388 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 BCL7BQ9BQE9 202 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 HDAC8Q9BY41 377 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 FOXQ1Q9C009 403 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 LMAN1LQ9HAT1 526 aa13.33□□□□□ -0.28
COPS7B-221ENST00000488111 WARS2Q9UGM6 360 aaKnown RBP13.33□□□□□ -0.28
COPS7B-221ENST00000488111 INPP4BO15327 924 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 HTR1AP08908 422 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ALDOCP09972 364 aaKnown RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 OGNP20774 298 aaKnown RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 C5AR1P21730 350 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 NR4A1P22736 598 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 FMO4P31512 558 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 FOXM1Q08050 763 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 GALNT1Q10472 559 aaPredicted RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 NFATC2Q13469 925 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 AGBL4Q5VU57 503 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 SLC22A16Q86VW1 577 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 SPATA6LQ8N4H0 392 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 LILRB4Q8NHJ6 448 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ING2Q9H160 280 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 IL1RL2Q9HB29 575 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 CPNE5Q9HCH3 593 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 CD93Q9NPY3 652 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 C2orf42Q9NWW7 574 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 FBXL12Q9NXK8 326 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ANAPC2Q9UJX6 822 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 PCDHGA11Q9Y5H2 935 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 PCDHA9Q9Y5H5 950 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 PRR23AA6NEV1 266 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 NEMP2A6NFY4 417 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 PSMD11O00231 422 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 NR5A2O00482 541 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ADH1BP00325 375 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 DNTTP04053 509 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ITIH1P19827 911 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 TAS2R38P59533 333 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ELP6Q0PNE2 266 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 TYSND1Q2T9J0 566 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ATP13A5Q4VNC0 1218 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 UGT3A1Q6NUS8 523 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ZNF549Q6P9A3 640 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 SNX20Q7Z614 316 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 SERPINA9Q86WD7 417 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ARMC8Q8IUR7 673 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ZCCHC7Q8N3Z6 543 aaKnown RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 OR6Q1Q8NGQ2 317 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 HEXDCQ8WVB3 486 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 ZNF486Q96H40 463 aaPredicted RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 RIOK2Q9BVS4 552 aaKnown RBP13.32□□□□□ -0.28
COPS7B-221ENST00000488111 BOCQ9BWV1 1114 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 FAM83DQ9H4H8 585 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 SP140LQ9H930 580 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 CRLS1Q9UJA2 301 aa13.32□□□□□ -0.28
COPS7B-221ENST00000488111 A0A087X1B8 175 aa13.31□□□□□ -0.28
COPS7B-221ENST00000488111 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
COPS7B-221ENST00000488111 GABARAPO95166 117 aa13.31□□□□□ -0.28
COPS7B-221ENST00000488111 PCDH8O95206 1070 aa13.31□□□□□ -0.28
COPS7B-221ENST00000488111 C6P13671 934 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms