RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 GPR174Q9BXC1 333 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 OSBPL8Q9BZF1 889 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 PABPC3Q9H361 631 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 TP63Q9H3D4 680 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 FBXL12Q9NXK8 326 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 LPAR3Q9UBY5 353 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 NKX1-2Q9UD57 310 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 IL36AQ9UHA7 158 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 NUMA1Q14980 2115 aa6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 MUC22E2RYF6 1773 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-209ENST00000487211 CKAP5Q14008 2032 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 SRRM3A6NNA2 597 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 KCNK1O00180 336 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 KPNA3O00505 521 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 TRAFD1O14545 582 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 MPPED1O15442 326 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ZSCAN12O43309 604 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 RNASEH2AO75792 299 aaKnown RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 PIGNO95427 931 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ONECUT2O95948 504 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 UGT2B4P06133 528 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 HKR1P10072 659 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 CCNB1P14635 433 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 MAKP20794 623 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 TGM2P21980 687 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 CXCR5P32302 372 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 MMP13P45452 471 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 SNRPD1P62314 119 aaKnown RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 AP2B1P63010 937 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 OTUD4Q01804 1114 aaKnown RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 NIPAL4Q0D2K0 466 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 AP1B1Q10567 949 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 CNTN1Q12860 1018 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ZBTB17Q13105 803 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 TFDP2Q14188 446 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 RFTN1Q14699 578 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 PDK1Q15118 436 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ZNF805Q5CZA5 627 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ZNF569Q5MCW4 686 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 PIP5KL1Q5T9C9 394 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ATPAF1Q5TC12 328 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 FAM46CQ5VWP2 391 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 NCEH1Q6PIU2 408 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 GDPD4Q6W3E5 623 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 CAMK1DQ8IU85 385 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 CCDC13Q8IYE1 715 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 SLC35F6Q8N357 371 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 C17orf53Q8N3J3 647 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 RYBPQ8N488 228 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ATPAF2Q8N5M1 289 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 UBL4BQ8N7F7 174 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 TRIM58Q8NG06 486 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ARRDC2Q8TBH0 407 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ACTL9Q8TC94 416 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 GANCQ8TET4 914 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 P3H4Q92791 437 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 RFKQ969G6 155 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 GDAP1L1Q96MZ0 367 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 WDR24Q96S15 920 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 IL12RB2Q99665 862 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 OMDQ99983 421 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 MGME1Q9BQP7 344 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 NUDT22Q9BRQ3 303 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 RTKNQ9BST9 563 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 CINPQ9BW66 212 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 C6orf106Q9H6K1 298 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 ZDHHC6Q9H6R6 413 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 EBF2Q9HAK2 575 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 USP29Q9HBJ7 922 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 NOD2Q9HC29 1040 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 NT5MQ9NPB1 228 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 TRIM36Q9NQ86 728 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 FSCN3Q9NQT6 498 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 RBM22Q9NW64 420 aaKnown RBP eCLIP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 SCML1Q9UN30 329 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 SH2B3Q9UQQ2 575 aa6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 R3HDM2Q9Y2K5 976 aaKnown RBP6.15□□□□□ -1.42
RTFDC1-209ENST00000487211 NYNRINQ9P2P1 1898 aaKnown RBP6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D3DA0A087WVF3 549 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D3IA0A087WXS9 549 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D3EA0A087X179 549 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D3KA0A087X1G2 549 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D3FA6NER0 549 aaPredicted RBP6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM47DPA6NHR8 397 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 HMX3A6NHT5 357 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 C16orf96A6NNT2 1141 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D3LB9A6J9 549 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 APOC4-APOC2K7ER74 178 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 M0R3H8 397 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 PMPCBO75439 489 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 RHOBTB1O94844 696 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TJP3O95049 919 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 IGSF6O95976 241 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 APOC2P02655 101 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 PRKCGP05129 697 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 HLA-DQB2P05538 268 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 MMP2P08253 660 aa6.14□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D3HP0C7X1 549 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms