RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 B3GNT3Q9Y2A9 372 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 KLK4Q9Y5K2 254 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 NBPF19A0A087WUL8 3843 aa23.47■■□□□ 1.35
LIME1-206ENST00000487026 SPTAN1Q13813 2472 aaKnown RBP23.47■■□□□ 1.35
LIME1-206ENST00000487026 E5RI56 91 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 SEMA7AO75326 666 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 PAMP19021 973 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 ATP5DP30049 168 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 SOX8P57073 446 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 ESPL1Q14674 2120 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 ANKRD20A4Q4UJ75 823 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 DENND6AQ8IWF6 608 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 SNRNP40Q96DI7 357 aaKnown RBP23.46■■□□□ 1.35
LIME1-206ENST00000487026 MESP1Q9BRJ9 268 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 SLC26A1Q9H2B4 701 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 ENAMQ9NRM1 1142 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 HS3ST3B1Q9Y662 390 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 FAM169AQ9Y6X4 670 aa23.46■■□□□ 1.35
LIME1-206ENST00000487026 CTAGE9A4FU28 777 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 SDR42E2A6NKP2 422 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 PSIP1O75475 530 aaKnown RBP23.45■■□□□ 1.34
LIME1-206ENST00000487026 CMPK1P30085 196 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 CLCN7P51798 805 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 AIMP2Q13155 320 aaKnown RBP23.45■■□□□ 1.34
LIME1-206ENST00000487026 CTBP1Q13363 440 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 ZNF470Q6ECI4 717 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 KIRREL2Q6UWL6 708 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 IGFL3Q6UXB1 125 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 RNF44Q7L0R7 432 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 PARP9Q8IXQ6 854 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 PRSS58Q8IYP2 241 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 IQCKQ8N0W5 287 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 RASGEF1CQ8N431 466 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 INPP5DQ92835 1189 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 PKP4Q99569 1192 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 ZNF304Q9HCX3 659 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 FBXO6Q9NRD1 293 aaPredicted RBP23.45■■□□□ 1.34
LIME1-206ENST00000487026 ASF1BQ9NVP2 202 aa23.45■■□□□ 1.34
LIME1-206ENST00000487026 FAM237BA0A1B0GVD1 139 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 OR2A25A4D2G3 310 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 USP1O94782 785 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 COILP38432 576 aaPredicted RBP23.44■■□□□ 1.34
LIME1-206ENST00000487026 CUL1Q13616 776 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 THOC5Q13769 683 aaKnown RBP23.44■■□□□ 1.34
LIME1-206ENST00000487026 PRAMEF13Q5VWM6 474 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 REXO1L1PQ8IX06 675 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 ZADH2Q8N4Q0 377 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 PPFIBP2Q8ND30 876 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 SMPDL3AQ92484 453 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 NACC2Q96BF6 587 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 ILKAPQ9H0C8 392 aaPredicted RBP23.44■■□□□ 1.34
LIME1-206ENST00000487026 SYNPO2LQ9H987 977 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 MRPS30Q9NP92 439 aaKnown RBP23.44■■□□□ 1.34
LIME1-206ENST00000487026 ABCF3Q9NUQ8 709 aa23.44■■□□□ 1.34
LIME1-206ENST00000487026 MAGEB16A2A368 324 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 VSTM2BA6NLU5 285 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 H0YGG7 62 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 MYO1CO00159 1063 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 KLHL41O60662 606 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 IPO13O94829 963 aaKnown RBP23.43■■□□□ 1.34
LIME1-206ENST00000487026 ERGP11308 486 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 RPA3P35244 121 aaPredicted RBP23.43■■□□□ 1.34
LIME1-206ENST00000487026 ARF3P61204 181 aaPredicted RBP23.43■■□□□ 1.34
LIME1-206ENST00000487026 RBBP7Q16576 425 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 HIST2H2BCQ6DN03 193 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 ZNF549Q6P9A3 640 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 CCDC137Q6PK04 289 aaKnown RBP23.43■■□□□ 1.34
LIME1-206ENST00000487026 AGGF1Q8N302 714 aaeCLIP23.43■■□□□ 1.34
LIME1-206ENST00000487026 GIMAP7Q8NHV1 300 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 PRR7Q8TB68 274 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 PBKQ96KB5 322 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 SERPINB12Q96P63 405 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 ZFYVE21Q9BQ24 234 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 SLC29A3Q9BZD2 475 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 INTS10Q9NVR2 710 aaKnown RBP23.43■■□□□ 1.34
LIME1-206ENST00000487026 NXT1Q9UKK6 140 aaKnown RBP23.43■■□□□ 1.34
LIME1-206ENST00000487026 VPS9D1Q9Y2B5 631 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 MED16Q9Y2X0 877 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 NEU2Q9Y3R4 380 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 CSAG2Q9Y5P2 127 aa23.43■■□□□ 1.34
LIME1-206ENST00000487026 PCM1Q15154 2024 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 IGKV1-8A0A0C4DH67 115 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 ZCWPW2A0A1B0GU75 182 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 CATP04040 527 aaKnown RBP23.42■■□□□ 1.34
LIME1-206ENST00000487026 RNF224P0DH78 156 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 ERVK-10P10266 1014 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 MLNP12872 115 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 VARSP26640 1264 aaKnown RBP23.42■■□□□ 1.34
LIME1-206ENST00000487026 PNLIPRP1P54315 467 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 KLC1Q07866 573 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 NR6A1Q15406 480 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 HIF1AQ16665 826 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 CUZD1Q86UP6 607 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 MCUQ8NE86 351 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 STT3BQ8TCJ2 826 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 TM9SF4Q92544 642 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 C10orf90Q96M02 699 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 PLCD4Q9BRC7 762 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 CRB3Q9BUF7 120 aa23.42■■□□□ 1.34
LIME1-206ENST00000487026 XAB2Q9HCS7 855 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms