RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 LOC102723532A0A0G2JNH3 316 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 FAM187AA6NFU0 413 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 B8ZZF3 427 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 E7ESA3 106 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 GFYI3L273 518 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 ZBTB14O43829 449 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 EIF2S1P05198 315 aaKnown RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 RAB40ALP0C0E4 278 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 PLA2G2AP14555 144 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 SAT1P21673 171 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 IMPA1P29218 277 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 CALCOCO2Q13137 446 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 ZC3H12BQ5HYM0 836 aaKnown RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 THEMIS2Q5TEJ8 643 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 HECTD2Q5U5R9 776 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 UGT3A1Q6NUS8 523 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 KIAA0408Q6ZU52 694 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 OR4N4Q8N0Y3 316 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 MYO1HQ8N1T3 1032 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 C9orf43Q8TAL5 461 aaPredicted RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 DLG3Q92796 817 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 ZUFSPQ96AP4 578 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 ABHD17AQ96GS6 310 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 OLFM1Q99784 485 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 TRIM55Q9BYV6 548 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 SLC25A18Q9H1K4 315 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 ADNPQ9H2P0 1102 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 SYNPO2LQ9H987 977 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 SAYSD1Q9NPB0 183 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 GRHL1Q9NZI5 618 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 ZFATQ9P243 1243 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 STOX2Q9P2F5 926 aaPredicted RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 GPN3Q9UHW5 284 aaPredicted RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 SRPK3Q9UPE1 567 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 HEMK1Q9Y5R4 338 aaPredicted RBP11.77□□□□□ -0.53
MSH5-216ENST00000484309 IGKV1-8A0A0C4DH67 115 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 TARM1B6A8C7 271 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 E7ENX8 843 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 K7EM74 188 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 SLC28A2O43868 658 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 CNOT3O75175 753 aaKnown RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 RFPL1O75677 317 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 FKBP9O95302 570 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 SFTPCP11686 197 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 ITGAXP20702 1163 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 FDXRP22570 491 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 OTX2P32243 289 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 GCGRP47871 477 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 RGS4P49798 205 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 DCDP81605 110 aaKnown RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 TAP2Q03519 686 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 MGAT5Q09328 741 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 ZNF460Q14592 562 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 ARHGAP19Q14CB8 494 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 TRADDQ15628 312 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 PHKG1Q16816 387 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 NKAIN1Q4KMZ8 207 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 WASHC2DQ5SRD0 308 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 ICE2Q659A1 982 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 RNF44Q7L0R7 432 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 MAATS1Q7Z4T9 603 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 ADCK2Q7Z695 626 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 STRA8Q7Z7C7 330 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 TTC29Q8NA56 475 aaPredicted RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 FBXO15Q8NCQ5 510 aaPredicted RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 PROKR1Q8TCW9 393 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 ADAMTS17Q8TE56 1095 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 ALKBH8Q96BT7 664 aaKnown RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 DPH2Q9BQC3 489 aaPredicted RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 TRIM4Q9C037 500 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 SMYD2Q9NRG4 433 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 CUTCQ9NTM9 273 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 CUEDC1Q9NWM3 386 aaPredicted RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 WHRNQ9P202 907 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 IFT80Q9P2H3 777 aaPredicted RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 PDE10AQ9Y233 779 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 TP53TG5Q9Y2B4 290 aa11.76□□□□□ -0.53
MSH5-216ENST00000484309 PTRH2Q9Y3E5 179 aaKnown RBP11.76□□□□□ -0.53
MSH5-216ENST00000484309 BSNQ9UPA5 3926 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 OR2A25A4D2G3 310 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 ZNF839A8K0R7 811 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 EIF3FO00303 357 aaPredicted RBP11.75□□□□□ -0.53
MSH5-216ENST00000484309 DSCR3O14972 297 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 MED26O95402 600 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 TSPAN12O95859 305 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 STATHP02808 62 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 SSTR1P30872 391 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 SKIV2L2P42285 1042 aaKnown RBP11.75□□□□□ -0.53
MSH5-216ENST00000484309 PMS2P54278 862 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 PLTPP55058 493 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 TBPL1P62380 186 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 ATP1A4Q13733 1029 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 GRM7Q14831 915 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 TCTE1Q5JU00 501 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 DUPD1Q68J44 220 aa11.75□□□□□ -0.53
MSH5-216ENST00000484309 LRRC8EQ6NSJ5 796 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms