RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SLC18A3Q16572 532 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 KRTCAP3Q53RY4 240 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 FGD2Q7Z6J4 655 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 TGIF2LYQ8IUE0 185 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 TMTC1Q8IUR5 882 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 CCDC50Q8IVM0 306 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 SIAH3Q8IW03 269 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 SLC22A15Q8IZD6 547 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 BEST3Q8N1M1 668 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 DNAAF3Q8N9W5 541 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 MDS2Q8NDY4 140 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 CFAP61Q8NHU2 1237 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 PHF10Q8WUB8 498 aaKnown RBP10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 SLC22A18Q96BI1 424 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 CDKN2AIPNLQ96HQ2 116 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 FRMD6Q96NE9 622 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 C19orf43Q9BQ61 176 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 BPIFA3Q9BQP9 254 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 TRIM51Q9BSJ1 452 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 YIPF2Q9BWQ6 316 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 SYNPO2LQ9H987 977 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 NLE1Q9NVX2 485 aaPredicted RBP10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 ANKRD10Q9NXR5 420 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 HCFC1P51610 2035 aa10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 HRNRQ86YZ3 2850 aaPredicted RBP10.32□□□□□ -0.76
SMARCC1-205ENST00000483847 hCG_1818297A0A087WSY0 165 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 IGHV3-20A0A0C4DH32 117 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 FAM221AA4D161 298 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 HACD1B0YJ81 288 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 TARM1B6A8C7 271 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 TTI1O43156 1089 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ASNA1O43681 348 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 OR1I1O60431 355 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 SLCO2B1O94956 709 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ZRANB2O95218 330 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 HEXBP07686 556 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 PYGBP11216 843 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 DRD2P14416 443 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ABOP16442 354 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 TPH1P17752 444 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 KLK2P20151 261 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 COMTP21964 271 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 CCR7P32248 378 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 TUBA3CQ13748 450 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 DSG2Q14126 1118 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 SYT16Q17RD7 645 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 MUM1Q2TAK8 710 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ASTE1Q2TB18 679 aaPredicted RBP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 DNAJC21Q5F1R6 531 aaKnown RBP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ANKRD20A2Q5SQ80 823 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ANKRD20A1Q5TYW2 823 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ANKRD20A3Q5VUR7 823 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ITPRIPL1Q6GPH6 555 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 TUBA3EQ6PEY2 450 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 TMEM205Q6UW68 189 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 RNF44Q7L0R7 432 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 SHISA5Q8N114 240 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 AMER3Q8N944 861 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ZUFSPQ96AP4 578 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 MIPEPQ99797 713 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 TBL1YQ9BQ87 522 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 NAT10Q9H0A0 1025 aaKnown RBP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 GOLPH3Q9H4A6 298 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 ARNT2Q9HBZ2 717 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 PPT2Q9UMR5 302 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 AAR2Q9Y312 384 aaKnown RBP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 LUC7L2Q9Y383 392 aaKnown RBP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 FAM169AQ9Y6X4 670 aa10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 NSD1Q96L73 2696 aaPredicted RBP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 INTS1Q8N201 2190 aaKnown RBP10.31□□□□□ -0.76
SMARCC1-205ENST00000483847 AKAP6Q13023 2319 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 SCN2AQ99250 2005 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 NKX2-6A6NCS4 301 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 ASPDHA6ND91 283 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 RCCD1A6NED2 376 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 SMTNL1A8MU46 457 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 E9PLN8 166 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 H7C0C1 242 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 RASGRF2O14827 1237 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 MAN1A2O60476 641 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 SEC24DO94855 1032 aaPredicted RBP10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 MYBL2P10244 700 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 CD96P40200 585 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 ATP5OP48047 213 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 MARCKSL1P49006 195 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 HSPA14Q0VDF9 509 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 ITIH4Q14624 930 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 POU6F1Q14863 301 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 PRTGQ2VWP7 1150 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 CCSMST1Q4G0I0 132 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 RNFT1Q5M7Z0 435 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 ACER2Q5QJU3 275 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 SPINK14Q6IE38 97 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 PACS1Q6VY07 963 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 TMEM200AQ86VY9 491 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 DCUN1D3Q8IWE4 304 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 ZC3H7AQ8IWR0 971 aaKnown RBP10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 MARVELD2Q8N4S9 558 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 OR2L3Q8NG85 312 aa10.3□□□□□ -0.76
SMARCC1-205ENST00000483847 LKAAEAR1Q8TD35 194 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms