RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 C1orf146Q5VVC0 180 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 NXPE4Q6UWF7 544 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 SUSD1Q6UWL2 747 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 WASH2PQ6VEQ5 465 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 EFCAB3Q8N7B9 438 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 OR7G3Q8NG95 312 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 OR1E3Q8WZA6 343 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 C11orf24Q96F05 449 aaPredicted RBP13.58□□□□□ -0.24
CLK3-204ENST00000483723 OR2M4Q96R27 311 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 EFCAB11Q9BUY7 163 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 CHRDQ9H2X0 955 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 LTB4R2Q9NPC1 389 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 WASH6PQ9NQA3 447 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 WSB2Q9NYS7 404 aaPredicted RBP13.58□□□□□ -0.24
CLK3-204ENST00000483723 TMEM181Q9P2C4 612 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 NKX1-2Q9UD57 310 aaPredicted RBP13.58□□□□□ -0.24
CLK3-204ENST00000483723 CD300AQ9UGN4 299 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 SH2B3Q9UQQ2 575 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 KCNK6Q9Y257 313 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 MRPS17Q9Y2R5 130 aaKnown RBP13.58□□□□□ -0.24
CLK3-204ENST00000483723 GPSM3Q9Y4H4 160 aa13.58□□□□□ -0.24
CLK3-204ENST00000483723 KRBA1A5PL33 1030 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 ZNF839A8K0R7 811 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 FXYD1O00168 92 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 ANGPT2O15123 496 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 CFLARO15519 480 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 PSMG1O95456 288 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 NPPAP01160 153 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 BCKDHAP12694 445 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 AMD1P17707 334 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 ME2P23368 584 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 VARSP26640 1264 aaKnown RBP13.57□□□□□ -0.24
CLK3-204ENST00000483723 AKT2P31751 481 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 FOXM1Q08050 763 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 LAPTM5Q13571 262 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 CLCA4Q14CN2 919 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 CATSPEREQ5SY80 951 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 CACHD1Q5VU97 1274 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 KIAA0895LQ68EN5 471 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 ABI3BPQ7Z7G0 1075 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 PGBD3Q8N328 593 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 DPP10Q8N608 796 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 LMNTD1Q8N9Z9 388 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 GLB1L3Q8NCI6 653 aaPredicted RBP13.57□□□□□ -0.24
CLK3-204ENST00000483723 SLC5A11Q8WWX8 675 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 SLC45A3Q96JT2 553 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 C12orf66Q96MD2 445 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 IL17FQ96PD4 163 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 NELL2Q99435 816 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 HAUS8Q9BT25 410 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 MVB12BQ9H7P6 319 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 GID8Q9NWU2 228 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 C2orf42Q9NWW7 574 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 LEF1Q9UJU2 399 aaPredicted RBP13.57□□□□□ -0.24
CLK3-204ENST00000483723 CA5BQ9Y2D0 317 aa13.57□□□□□ -0.24
CLK3-204ENST00000483723 A0A1W2PPV9 198 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 CCDC154A6NI56 674 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 C9JVG2 144 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 H0Y8X5 98 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 TRIM38O00635 465 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 NUDT1P36639 197 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 THOP1P52888 689 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 CLDN8P56748 225 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PAGE3Q5JUK9 113 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PRAMEF14Q5SWL7 426 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PRAMEF13Q5VWM6 474 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 MED27Q6P2C8 311 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PRMT9Q6P2P2 845 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 AAGABQ6PD74 315 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 ENPP7Q6UWV6 458 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 ABRAXAS1Q6UWZ7 409 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 FAM9CQ8IZT9 166 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 LIX1Q8N485 282 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 SMPDL3AQ92484 453 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 APIPQ96GX9 242 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 CAMK1GQ96NX5 476 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 FERD3LQ96RJ6 166 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PCBD2Q9H0N5 130 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 C6orf106Q9H6K1 298 aaPredicted RBP13.56□□□□□ -0.24
CLK3-204ENST00000483723 CARS2Q9HA77 564 aaKnown RBP13.56□□□□□ -0.24
CLK3-204ENST00000483723 GEMIN8Q9NWZ8 242 aaKnown RBP13.56□□□□□ -0.24
CLK3-204ENST00000483723 ABCD2Q9UBJ2 740 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 VPS29Q9UBQ0 182 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PCOLCE2Q9UKZ9 415 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PLAGL1Q9UM63 463 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 DMTF1Q9Y222 760 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
CLK3-204ENST00000483723 CFAP20Q9Y6A4 193 aaKnown RBP13.56□□□□□ -0.24
CLK3-204ENST00000483723 PRAMEF26H0Y7S4 382 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 FOXE1O00358 373 aaPredicted RBP13.56□□□□□ -0.24
CLK3-204ENST00000483723 HTR1BP28222 390 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 MAPK1P28482 360 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 CCNIQ14094 377 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 PAGE2BQ5JRK9 111 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 LAYNQ6UX15 382 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 LPCAT2Q7L5N7 544 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 TMPRSS11BQ86T26 416 aa13.56□□□□□ -0.24
CLK3-204ENST00000483723 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms