RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 MED8Q96G25 268 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 PAFAH2Q99487 392 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 DPH7Q9BTV6 452 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 ATG10Q9H0Y0 220 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 ANKZF1Q9H8Y5 726 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 TLK1Q9UKI8 766 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 SNX7Q9UNH6 387 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 SSUH2Q9Y2M2 353 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 ACOT9Q9Y305 439 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 EXOC1LA0A1B0GW35 172 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 HMX2A2RU54 273 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 E7EQ34 232 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 OR2B3O76000 313 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 GUCA1CO95843 209 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 NTRK1P04629 796 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 SLC35E2BP0CK96 405 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 MYBL2P10244 700 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 CD1DP15813 335 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 GABRA4P48169 554 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 TBPL1P62380 186 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 CDKL1Q00532 357 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 NAE1Q13564 534 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 TSNQ15631 228 aaKnown RBP20.09■□□□□ 0.81
SEC13-217ENST00000482647 CAPN13Q6MZZ7 669 aaPredicted RBP20.09■□□□□ 0.81
SEC13-217ENST00000482647 GALNT6Q8NCL4 622 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 ALKBH8Q96BT7 664 aaKnown RBP20.09■□□□□ 0.81
SEC13-217ENST00000482647 CCNL2Q96S94 520 aaPredicted RBP20.09■□□□□ 0.81
SEC13-217ENST00000482647 EURLQ9NYK6 297 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 ANKMY1Q9P2S6 941 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 OARD1Q9Y530 152 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 PCDHB3Q9Y5E6 796 aa20.09■□□□□ 0.81
SEC13-217ENST00000482647 PKD1L2Q7Z442 2459 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 A0A087X1B8 175 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 HCRTR1O43613 425 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 CPNE3O75131 537 aaKnown RBP20.08■□□□□ 0.81
SEC13-217ENST00000482647 KRT38O76015 456 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 ANXA5P08758 320 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 HRH2P25021 359 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 CNTFP26441 200 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 SERPINB8P50452 374 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 YBX1P67809 324 aaKnown RBP20.08■□□□□ 0.81
SEC13-217ENST00000482647 ABHD18Q0P651 414 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 CSHL1Q14406 222 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 DEFB110Q30KQ9 67 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 LGSNQ5TDP6 509 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 PRAMEF13Q5VWM6 474 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 RNF31Q96EP0 1072 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 EGFL8Q99944 293 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 PLCD4Q9BRC7 762 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 SGPP1Q9BX95 441 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 UNKQ9C0B0 810 aaKnown RBP20.08■□□□□ 0.81
SEC13-217ENST00000482647 NMRAL1Q9HBL8 299 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 SNX15Q9NRS6 342 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 IRAK4Q9NWZ3 460 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 ZNF180Q9UJW8 692 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 PADI1Q9ULC6 663 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 AP1M2Q9Y6Q5 423 aa20.08■□□□□ 0.81
SEC13-217ENST00000482647 TEX51A0A1B0GUA7 166 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 HBQ1P09105 142 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 TYK2P29597 1187 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 HNMTP50135 292 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 SLC29A2Q14542 456 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 TAF1BQ53T94 588 aaPredicted RBP20.07■□□□□ 0.8
SEC13-217ENST00000482647 TLDC1Q6P9B6 456 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 C19orf48Q6RUI8 117 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 GPSM1Q86YR5 675 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 OR56A3Q8NH54 315 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 KIAA1191Q96A73 305 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 KIAA1143Q96AT1 154 aaPredicted RBP20.07■□□□□ 0.8
SEC13-217ENST00000482647 CCDC77Q9BR77 488 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 HAUS8Q9BT25 410 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 SLC7A5P2Q9GIP4 190 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 SPRTNQ9H040 489 aaPredicted RBP20.07■□□□□ 0.8
SEC13-217ENST00000482647 ACTR5Q9H9F9 607 aaPredicted RBP20.07■□□□□ 0.8
SEC13-217ENST00000482647 SLC6A20Q9NP91 592 aa20.07■□□□□ 0.8
SEC13-217ENST00000482647 OR2A25A4D2G3 310 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 ZNF749O43361 778 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 SRPX2O60687 465 aaPredicted RBP20.06■□□□□ 0.8
SEC13-217ENST00000482647 CTSVO60911 334 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 C2P06681 752 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 LTA4HP09960 611 aaKnown RBP20.06■□□□□ 0.8
SEC13-217ENST00000482647 TMPRSS3P57727 454 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 RELAQ04206 551 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 TCTE1Q5JU00 501 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 PRAMEF17Q5VTA0 474 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 CCDC81Q6ZN84 652 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 VASH2Q86V25 355 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 PAQR7Q86WK9 346 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 STAG3L4Q8TBR4 150 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 DCAKDQ8WVC6 231 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 CLIP3Q96DZ5 547 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 LRFN5Q96NI6 719 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 SELENOSQ9BQE4 189 aa20.06■□□□□ 0.8
SEC13-217ENST00000482647 A0A096LPK6 155 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 IGKV1-8A0A0C4DH67 115 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 H7BY64 318 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 ZSCAN9O15535 394 aaPredicted RBP20.05■□□□□ 0.8
SEC13-217ENST00000482647 KRT37O76014 449 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 ALDOAP04075 364 aaKnown RBP20.05■□□□□ 0.8
SEC13-217ENST00000482647 KLK3P07288 261 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms