RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ONECUT2O95948 504 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 ESR1P03372 595 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 RNF224P0DH78 156 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 PAMP19021 973 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 OGNP20774 298 aaKnown RBP14.57□□□□□ -0.08
LIMS3-203ENST00000480744 RPA3P35244 121 aaPredicted RBP14.57□□□□□ -0.08
LIMS3-203ENST00000480744 SOX8P57073 446 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 YBX1P67809 324 aaKnown RBP14.57□□□□□ -0.08
LIMS3-203ENST00000480744 SARNPP82979 210 aaKnown RBP14.57□□□□□ -0.08
LIMS3-203ENST00000480744 GPS1Q13098 491 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 HIF1AQ16665 826 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 TUBB8Q3ZCM7 444 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 ACSBG2Q5FVE4 666 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 KIAA0930Q6ICG6 404 aaPredicted RBP14.57□□□□□ -0.08
LIMS3-203ENST00000480744 SUSD1Q6UWL2 747 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 KIRREL2Q6UWL6 708 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 OR4N4Q8N0Y3 316 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 PRELID2Q8N945 189 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 TRIM58Q8NG06 486 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 OR9A1PQ8NGU1 263 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 INPP5DQ92835 1189 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 NACC2Q96BF6 587 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 TCF12Q99081 682 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 TRIM56Q9BRZ2 755 aaKnown RBP14.57□□□□□ -0.08
LIMS3-203ENST00000480744 DPH7Q9BTV6 452 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 CRB3Q9BUF7 120 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 SLC26A1Q9H2B4 701 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 ZNF304Q9HCX3 659 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 HOMER3Q9NSC5 361 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 IL1RAPL1Q9NZN1 696 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 GALPQ9UBC7 116 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 COPG1Q9Y678 874 aaKnown RBP14.57□□□□□ -0.08
LIMS3-203ENST00000480744 ARHGEF33A8MVX0 844 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 MED26O95402 600 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 MATN4O95460 622 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 F7P08709 466 aaPredicted RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 PKMP14618 531 aaKnown RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 ATP5DP30049 168 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 OCA2Q04671 838 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 ELOAQ14241 798 aaKnown RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 KCNJ11Q14654 390 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 NAA25Q14CX7 972 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 KLHL38Q2WGJ6 581 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 ANKRD20A4Q4UJ75 823 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 AGAP7PQ5VUJ5 663 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 ANKRD22Q5VYY1 191 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 NEPROQ6NW34 567 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 Q6ZS92 163 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 RNF44Q7L0R7 432 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 CUZD1Q86UP6 607 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 SMPDL3AQ92484 453 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 ZNF669Q96BR6 464 aaPredicted RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 VPS50Q96JG6 964 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 CABS1Q96KC9 395 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 CNDP1Q96KN2 507 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 AGAP4Q96P64 663 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 ZFYVE21Q9BQ24 234 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 WDR77Q9BQA1 342 aaPredicted RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 MRPS30Q9NP92 439 aaKnown RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 SEMA3GQ9NS98 782 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 ABCF3Q9NUQ8 709 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 CUEDC1Q9NWM3 386 aaPredicted RBP14.56□□□□□ -0.08
LIMS3-203ENST00000480744 CSAG2Q9Y5P2 127 aa14.56□□□□□ -0.08
LIMS3-203ENST00000480744 OR2A25A4D2G3 310 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 CTAGE9A4FU28 777 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 GOLGA8MH3BSY2 632 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 VPS26AO75436 327 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 KRT14P02533 472 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 CATP04040 527 aaKnown RBP14.55□□□□□ -0.08
LIMS3-203ENST00000480744 FBLP22087 321 aaKnown RBP14.55□□□□□ -0.08
LIMS3-203ENST00000480744 KLC1Q07866 573 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 DHX34Q14147 1143 aaKnown RBP14.55□□□□□ -0.08
LIMS3-203ENST00000480744 GBX1Q14549 363 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 MUM1Q2TAK8 710 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 ZNF470Q6ECI4 717 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 PRMT9Q6P2P2 845 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 ZNF662Q6ZS27 426 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 CENPUQ71F23 418 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 CILP2Q8IUL8 1156 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 OR11G2Q8NGC1 345 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 STT3BQ8TCJ2 826 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 MIEF2Q96C03 454 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 THOC3Q96J01 351 aaKnown RBP14.55□□□□□ -0.08
LIMS3-203ENST00000480744 PKP4Q99569 1192 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 MESP1Q9BRJ9 268 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 YIPF2Q9BWQ6 316 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 LHPPQ9H008 270 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 FAM114A2Q9NRY5 505 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 ZNF282Q9UDV7 671 aaPredicted RBP14.55□□□□□ -0.08
LIMS3-203ENST00000480744 VPS9D1Q9Y2B5 631 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 PCDHGA10Q9Y5H3 936 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 KLK4Q9Y5K2 254 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 SVILO95425 2214 aa14.55□□□□□ -0.08
LIMS3-203ENST00000480744 ANKUB1A6NFN9 424 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 VSTM2BA6NLU5 285 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 H0YGG7 62 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 MYO1CO00159 1063 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 MAP2K7O14733 419 aa14.54□□□□□ -0.08
LIMS3-203ENST00000480744 FFAR3O14843 346 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms