RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TSTA3Q13630 321 aaPredicted RBP18.99■□□□□ 0.63
LIME1-205ENST00000480139 ZIC1Q15915 447 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 DCAF12Q5T6F0 453 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 THEMIS2Q5TEJ8 643 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 SULT1C3Q6IMI6 304 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 LCTLQ6UWM7 567 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 UNQ6494/PRO21346Q6UXR6 183 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 CEACAM20Q6UY09 585 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 MED8Q96G25 268 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 TSNARE1Q96NA8 513 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 OR6C1Q96RD1 312 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 HAUS8Q9BT25 410 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 ACAT2Q9BWD1 397 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 FANCEQ9HB96 536 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 MRPS30Q9NP92 439 aaKnown RBP18.99■□□□□ 0.63
LIME1-205ENST00000480139 FGF21Q9NSA1 209 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 LGALS13Q9UHV8 139 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 ACSL6Q9UKU0 697 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 PLAAQ9Y263 795 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 OR2A25A4D2G3 310 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 C9orf172C9J069 976 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 AGRPO00253 132 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 MT-ND3P03897 115 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 RBP1P09455 135 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 HRH2P25021 359 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 SLC6A12P48065 614 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 GLRBP48167 497 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 GABRA4P48169 554 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 KCNC1P48547 511 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 RELAQ04206 551 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 FOXM1Q08050 763 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 CYP4F3Q08477 520 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 KCNAB1Q14722 419 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 TBC1D25Q3MII6 688 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 TECRLQ5HYJ1 363 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 FCRL6Q6DN72 434 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 FIGLAQ6QHK4 219 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 CDHR3Q6ZTQ4 885 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 FAM20CQ8IXL6 584 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 USP7Q93009 1102 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 ZNF501Q96CX3 271 aaPredicted RBP18.98■□□□□ 0.63
LIME1-205ENST00000480139 FCRL4Q96PJ5 515 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 KLHL25Q9H0H3 589 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 CCDC86Q9H6F5 360 aaKnown RBP18.98■□□□□ 0.63
LIME1-205ENST00000480139 CNOT10Q9H9A5 744 aaKnown RBP18.98■□□□□ 0.63
LIME1-205ENST00000480139 SLC6A20Q9NP91 592 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 PCMTD2Q9NV79 361 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 CD274Q9NZQ7 290 aa18.98■□□□□ 0.63
LIME1-205ENST00000480139 TMEM8BA6NDV4 472 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 SMIM23A6NLE4 172 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 S100BP04271 92 aaPredicted RBP18.97■□□□□ 0.63
LIME1-205ENST00000480139 GSTA1P08263 222 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 NPPBP16860 134 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 KRT15P19012 456 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 CD82P27701 267 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 PTCHD3Q3KNS1 767 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.97■□□□□ 0.63
LIME1-205ENST00000480139 ZNF425Q6IV72 752 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 IQCKQ8N0W5 287 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 CYP4X1Q8N118 509 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 DNAJC22Q8N4W6 341 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 MYRIPQ8NFW9 859 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 UBTD2Q8WUN7 234 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 PYCR2Q96C36 320 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 PLCD4Q9BRC7 762 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 DPH7Q9BTV6 452 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 FAM60AQ9NP50 221 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 PTBP2Q9UKA9 531 aaKnown RBP18.97■□□□□ 0.63
LIME1-205ENST00000480139 RARRES3Q9UL19 164 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 SNX7Q9UNH6 387 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 HEATR5BQ9P2D3 2071 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 WDFY3Q8IZQ1 3526 aa18.97■□□□□ 0.63
LIME1-205ENST00000480139 IGKV1-8A0A0C4DH67 115 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 NCF1BA6NI72 391 aaPredicted RBP18.96■□□□□ 0.63
LIME1-205ENST00000480139 NCF1CA8MVU1 366 aaPredicted RBP18.96■□□□□ 0.63
LIME1-205ENST00000480139 TAPBPO15533 448 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 KLK8O60259 260 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 PRAMEF10O60809 474 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 MTHFD2P13995 350 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 NCF1P14598 390 aaPredicted RBP18.96■□□□□ 0.63
LIME1-205ENST00000480139 SLC5A2P31639 672 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 YBX1P67809 324 aaKnown RBP18.96■□□□□ 0.63
LIME1-205ENST00000480139 GPR19Q15760 415 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 ZC3H12BQ5HYM0 836 aaKnown RBP18.96■□□□□ 0.63
LIME1-205ENST00000480139 BEND6Q5SZJ8 279 aaPredicted RBP18.96■□□□□ 0.63
LIME1-205ENST00000480139 SH2D5Q6ZV89 423 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 PAQR7Q86WK9 346 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 C17orf64Q86WR6 236 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 PPP1R3BQ86XI6 285 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 MDM1Q8TC05 714 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 PMEPA1Q969W9 287 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 OR4K3Q96R72 315 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 MRPL57Q9BQC6 102 aaKnown RBP18.96■□□□□ 0.63
LIME1-205ENST00000480139 TMEM79Q9BSE2 394 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 APMAPQ9HDC9 416 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 ENAMQ9NRM1 1142 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 TMEM184CQ9NVA4 438 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 ZNF358Q9NW07 568 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 WWOXQ9NZC7 414 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 TMCO1Q9UM00 188 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms