RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 FAM114A2Q9NRY5 505 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 CUTCQ9NTM9 273 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 P4HTMQ9NXG6 502 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 SPATA7Q9P0W8 599 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 LUZP4Q9P127 313 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 CRYL1Q9Y2S2 319 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
ATG4B-218ENST00000479554 CYSRT1A8MQ03 144 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 E5RI56 91 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 PRICKLE3O43900 615 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-218ENST00000479554 SEC31AO94979 1220 aaKnown RBP13.73□□□□□ -0.21
ATG4B-218ENST00000479554 ALPPP05187 535 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 UMODP07911 640 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 CHRM3P20309 590 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 ITGAXP20702 1163 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 UQCRFS1P47985 274 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 GBX1Q14549 363 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 SLC6A19Q695T7 634 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 TTC27Q6P3X3 843 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 SYDE1Q6ZW31 735 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-218ENST00000479554 PPP1R32Q7Z5V6 425 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 GALNT16Q8N428 558 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 RBMXL3Q8N7X1 1067 aaKnown RBP13.73□□□□□ -0.21
ATG4B-218ENST00000479554 GALNT11Q8NCW6 608 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 OR2L3Q8NG85 312 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 PNPLA2Q96AD5 504 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 ZNF669Q96BR6 464 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-218ENST00000479554 SLC22A11Q9NSA0 550 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 C5AR2Q9P296 337 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 MAP4K5Q9Y4K4 846 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 SEC16AO15027 2179 aa13.73□□□□□ -0.21
ATG4B-218ENST00000479554 UTP20O75691 2785 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 KLHL41O60662 606 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 CTSVO60911 334 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 MATN4O95460 622 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 ALBP02768 609 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 MLNP12872 115 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 PKMP14618 531 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 GNLYP22749 145 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 CMPK1P30085 196 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 VSX2P58304 361 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 SRSF1Q07955 248 aaKnown RBP eCLIP13.72□□□□□ -0.216e-6■■□□□ 14.3
ATG4B-218ENST00000479554 MYBPC3Q14896 1274 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 NAA25Q14CX7 972 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 ACSBG2Q5FVE4 666 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 ZNF470Q6ECI4 717 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 NEPROQ6NW34 567 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 EMBQ6PCB8 327 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 CENPUQ71F23 418 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 OVCH1Q7RTY7 1134 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 HDXQ7Z353 690 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 CAND1Q86VP6 1230 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 Q8NA96 180 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 AENQ8WTP8 325 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 IFT81Q8WYA0 676 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 ZNF285Q96NJ3 590 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 TRIM56Q9BRZ2 755 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 ERP44Q9BS26 406 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 WDR54Q9H977 334 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 XAB2Q9HCS7 855 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 ENAMQ9NRM1 1142 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 INTS10Q9NVR2 710 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 ZNF446Q9NWS9 450 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 IL1RAPL1Q9NZN1 696 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 MAP10Q9P2G4 905 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 NXT1Q9UKK6 140 aaKnown RBP13.72□□□□□ -0.21
ATG4B-218ENST00000479554 KLK4Q9Y5K2 254 aa13.72□□□□□ -0.21
ATG4B-218ENST00000479554 DOPEY2Q9Y3R5 2298 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 A0A0J9YVX5 310 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 FAM237BA0A1B0GVD1 139 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 A0A1W2PPV9 198 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 FITM1A5D6W6 292 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 ARHGEF33A8MVX0 844 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 GOLGA8MH3BSY2 632 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 AGPSO00116 658 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 SRPX2O60687 465 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 USP1O94782 785 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 IPO13O94829 963 aaKnown RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 ONECUT2O95948 504 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 CATP04040 527 aaKnown RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 MYBL2P10244 700 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 MMP11P24347 488 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 THOC5Q13769 683 aaKnown RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 FASTKQ14296 549 aaKnown RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 INPP5JQ15735 1006 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 NKG7Q16617 165 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 FAM214AQ32MH5 1076 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 TTLL9Q3SXZ7 439 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 ANKRD20A4Q4UJ75 823 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 PRR30Q53SZ7 412 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.71□□□□□ -0.21
ATG4B-218ENST00000479554 WASHC2DQ5SRD0 308 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 FRMPD2BQ6IN97 320 aa13.71□□□□□ -0.21
ATG4B-218ENST00000479554 COX15Q7KZN9 410 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms