RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 BPHLQ86WA6 291 aaPredicted RBP25.78■■□□□ 1.72
CCM2-211ENST00000478582 OR56A3Q8NH54 315 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 STAG3L4Q8TBR4 150 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 USP7Q93009 1102 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 ZUFSPQ96AP4 578 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 GPR78Q96P69 363 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 SGPP1Q9BX95 441 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 CCDC177Q9NQR7 707 aaPredicted RBP25.78■■□□□ 1.72
CCM2-211ENST00000478582 SOHLH2Q9NX45 425 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 EURLQ9NYK6 297 aa25.78■■□□□ 1.72
CCM2-211ENST00000478582 TARM1B6A8C7 271 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 GUCA1CO95843 209 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 TFEBP19484 476 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 CMPK1P30085 196 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 HNMTP50135 292 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 NAA25Q14CX7 972 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 ACAP2Q15057 778 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 ZIC1Q15915 447 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 TMEM164Q5U3C3 297 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 GPSM1Q86YR5 675 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 FAM20CQ8IXL6 584 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 RHEBL1Q8TAI7 183 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 MZB1Q8WU39 189 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 CABS1Q96KC9 395 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 TEFMQ96QE5 360 aaKnown RBP25.77■■□□□ 1.72
CCM2-211ENST00000478582 ZPBPQ9BS86 351 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 ASPSCR1Q9BZE9 553 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 KLHL25Q9H0H3 589 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 PCBD2Q9H0N5 130 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 ATG10Q9H0Y0 220 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 VPS11Q9H270 941 aa25.77■■□□□ 1.72
CCM2-211ENST00000478582 NBEAQ8NFP9 2946 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 C9orf172C9J069 976 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 POLR1CO15160 346 aaPredicted RBP25.76■■□□□ 1.71
CCM2-211ENST00000478582 PRAMEF10O60809 474 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 CCNDBP1O95273 360 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 EBLN1P0CF75 366 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 FGF5P12034 268 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 MAGP20916 626 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 GRIA3P42263 894 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 KCNC1P48547 511 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 TMPRSS3P57727 454 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 TBPL1P62380 186 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 ABATP80404 500 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 CLN3Q13286 438 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 NAE1Q13564 534 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 KCNAB1Q14722 419 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 DCAF12Q5T6F0 453 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 ICE2Q659A1 982 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 FIGLAQ6QHK4 219 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 CEACAM20Q6UY09 585 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 GPR155Q7Z3F1 870 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 OR6C1Q96RD1 312 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 MIPEPQ99797 713 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 ALG9Q9H6U8 611 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 TAC3Q9UHF0 121 aa25.76■■□□□ 1.71
CCM2-211ENST00000478582 KERAO60938 352 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 CXADRP78310 365 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 FOXM1Q08050 763 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 TSTA3Q13630 321 aaPredicted RBP25.75■■□□□ 1.71
CCM2-211ENST00000478582 FCRL6Q6DN72 434 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 CAPN13Q6MZZ7 669 aaPredicted RBP25.75■■□□□ 1.71
CCM2-211ENST00000478582 KLC3Q6P597 504 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 CDHR3Q6ZTQ4 885 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 OR8K5Q8NH50 307 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 ACMSDQ8TDX5 336 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 RHBDF1Q96CC6 855 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 ATOH8Q96SQ7 321 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 ACAT2Q9BWD1 397 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 APMAPQ9HDC9 416 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 FAM60AQ9NP50 221 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 MRPS30Q9NP92 439 aaKnown RBP25.75■■□□□ 1.71
CCM2-211ENST00000478582 FGF21Q9NSA1 209 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 ANKMY1Q9P2S6 941 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 TBK1Q9UHD2 729 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 RNF112Q9ULX5 631 aa25.75■■□□□ 1.71
CCM2-211ENST00000478582 CDH16O75309 829 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 GABRA4P48169 554 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 TUBB3Q13509 450 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 PRAMEF13Q5VWM6 474 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 LCTLQ6UWM7 567 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 KLHDC8AQ8IYD2 350 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 PLD6Q8N2A8 252 aaKnown RBP25.74■■□□□ 1.71
CCM2-211ENST00000478582 TCAIMQ8N3R3 496 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 DNAJC22Q8N4W6 341 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 ZNF501Q96CX3 271 aaPredicted RBP25.74■■□□□ 1.71
CCM2-211ENST00000478582 FCRL4Q96PJ5 515 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 EGFL8Q99944 293 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 ROPN1BQ9BZX4 212 aaPredicted RBP25.74■■□□□ 1.71
CCM2-211ENST00000478582 ROPN1Q9HAT0 212 aaPredicted RBP25.74■■□□□ 1.71
CCM2-211ENST00000478582 KLHL20Q9Y2M5 609 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 B3GALT1Q9Y5Z6 326 aa25.74■■□□□ 1.71
CCM2-211ENST00000478582 CD82P27701 267 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 GGT5P36269 586 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 SLCO1A2P46721 670 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 YBX1P67809 324 aaKnown RBP25.73■■□□□ 1.71
CCM2-211ENST00000478582 TSNAXIP1Q2TAA8 658 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 THEMIS2Q5TEJ8 643 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 SULT1C3Q6IMI6 304 aa25.73■■□□□ 1.71
CCM2-211ENST00000478582 LCA5Q86VQ0 697 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms