RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 HEXBP07686 556 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 ACADLP28330 430 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 PEX19P40855 299 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 ZFP36L2P47974 494 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC25A11Q02978 314 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 PPIDQ08752 370 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 PTPRCAPQ14761 206 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 TAZQ16635 292 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 MAPKAPK3Q16644 382 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 MEP1AQ16819 746 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 SWI5Q1ZZU3 235 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 CMPK2Q5EBM0 449 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 Q5PR19 223 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 HMBOX1Q6NT76 420 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 LYPD8Q6UX82 237 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF227Q86WZ6 799 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 CRLF3Q8IUI8 442 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 TBC1D21Q8IYX1 336 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 PQLC3Q8N755 202 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 HORMAD2Q8N7B1 307 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 CCNYQ8ND76 341 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 FAM222BQ8WU58 562 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 BDH2Q9BUT1 245 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 SARGQ9BW04 601 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 CEP41Q9BYV8 373 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 LUC7LQ9NQ29 371 aaKnown RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 STOX2Q9P2F5 926 aaPredicted RBP6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 POLG2Q9UHN1 485 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 ALG6Q9Y672 507 aa6.92□□□□□ -1.3
SPTLC1-205ENST00000477888 ANK3Q12955 4377 aaKnown RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 LOC105369274A0A096LPK9 316 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 IGHV3-20A0A0C4DH32 117 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 LOC102723532A0A0G2JNH3 316 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 A0A0G2JNJ9 132 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 GABRR3A8MPY1 467 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 FFAR3O14843 346 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 GPR42O15529 346 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 NME2P1O60361 137 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC25A12O75746 678 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 SRP72O76094 671 aaKnown RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 EPOP01588 193 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 FTLP02792 175 aaPredicted RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 ATP1B2P14415 290 aaPredicted RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 TFEBP19484 476 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 FBLP22087 321 aaKnown RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 NME2P22392 152 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC26A3P40879 764 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 NR0B1P51843 470 aaKnown RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 VSX2P58304 361 aaPredicted RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 DPYSL3Q14195 570 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 KRT81Q14533 505 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 TPD52L1Q16890 204 aaPredicted RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 BTBD16Q32M84 506 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 GXYLT1Q4G148 440 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 FLYWCH1Q4VC44 716 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 SIRPB2Q5JXA9 342 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF468Q5VIY5 522 aaPredicted RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 FRMPD2BQ6IN97 320 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 PPP1R2P3Q6NXS1 205 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 ARHGAP11AQ6P4F7 1023 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 FIGLAQ6QHK4 219 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 PRSS57Q6UWY2 283 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 CAPN12Q6ZSI9 719 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 PAQR7Q86WK9 346 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 OR4N4Q8N0Y3 316 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 LRRC75A-AS1Q8N1F1 130 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 AMER3Q8N944 861 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 LINC01555Q8NAE3 123 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 MLKLQ8NB16 471 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 POGLUT1Q8NBL1 392 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 OR5K2Q8NHB8 316 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 SREK1Q8WXA9 508 aaKnown RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 ZUFSPQ96AP4 578 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 DCUN1D1Q96GG9 259 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 C10orf90Q96M02 699 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 Q96MF0 132 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 KCNK17Q96T54 332 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 TTYH2Q9BSA4 534 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 MENTQ9BUN1 341 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 SLC6A16Q9GZN6 736 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 ASB8Q9H765 288 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 C14orf105Q9NVL8 296 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 UBP1Q9NZI7 540 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 HACD3Q9P035 362 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 TRPC4Q9UBN4 977 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 Q9UFV3 132 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 ZC3H7BQ9UGR2 993 aaKnown RBP6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 PLAGL1Q9UM63 463 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 ASF1AQ9Y294 204 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 PKP3Q9Y446 797 aa6.91□□□□□ -1.3
SPTLC1-205ENST00000477888 TRIM64A6NGJ6 449 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 TRIM64BA6NI03 449 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 TARM1B6A8C7 271 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 CDK2AP1O14519 115 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 HS6ST1O60243 411 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 PRMT3O60678 531 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 SEC24DO94855 1032 aaPredicted RBP6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 AP2A1O95782 977 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 C8orf89P0DMQ9 161 aa6.9□□□□□ -1.3
SPTLC1-205ENST00000477888 GLI4P10075 376 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms