RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CAPN1P07384 714 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CD48P09326 243 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CYP2A6P11509 494 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 FOLR1P15328 257 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 XRCC1P18887 633 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 PSMA2P25787 234 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 EEF1GP26641 437 aaKnown RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 MMP13P45452 471 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 SPINT3P49223 89 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 RENBPP51606 427 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CLCNKAP51800 687 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 COPB1P53618 953 aaKnown RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 MC1RQ01726 317 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 DSC2Q02487 901 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 DUSP2Q05923 314 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 BIRC2Q13490 618 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 ZNF235Q14590 738 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 INPP5JQ15735 1006 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 DPYSL2Q16555 572 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 SMTNL2Q2TAL5 461 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 ARMC12Q5T9G4 340 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 PRAMEF17Q5VTA0 474 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 C1QL3Q5VWW1 255 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 DCUN1D2Q6PH85 259 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 ZNF517Q6ZMY9 492 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 USP45Q70EL2 814 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 C11orf96Q7Z7L8 435 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 ADGRG6Q86SQ4 1221 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 TICAM1Q8IUC6 712 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 FAM114A1Q8IWE2 563 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CDYL2Q8N8U2 506 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 MAML1Q92585 1016 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 INPP5DQ92835 1189 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 NINJ1Q92982 152 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CAVIN3Q969G5 261 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 PPM1MQ96MI6 270 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 TGM7Q96PF1 710 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CSPG4P5Q96PW8 444 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 NRTNQ99748 197 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 HERPUD2Q9BSE4 406 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 EFHD1Q9BUP0 239 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 MLST8Q9BVC4 326 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 NUDT9Q9BW91 350 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 PITHD1Q9GZP4 211 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 TWSG1Q9GZX9 223 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 OR2AG1Q9H205 316 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 SYNPO2LQ9H987 977 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 UCK1Q9HA47 277 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 LHX9Q9NQ69 397 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CASS4Q9NQ75 786 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 SEPT11Q9NVA2 429 aaKnown RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 KCTD5Q9NXV2 234 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 VPS18Q9P253 973 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 KLHL42Q9P2K6 505 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 CNOT8Q9UFF9 292 aaKnown RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 LNPEPQ9UIQ6 1025 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 NTNG1Q9Y2I2 539 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 WDR37Q9Y2I8 494 aa4.47□□□□□ -1.69
CKS1B-207ENST00000477676 ANKHD1Q8IWZ3 2542 aaKnown RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 INTS1Q8N201 2190 aaKnown RBP4.47□□□□□ -1.69
CKS1B-207ENST00000477676 KIR2DS5A0A0G2JLQ3 304 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 A0A0G2JNG1 304 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 A0A1W2PQ67 120 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ARGFXA6NJG6 315 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 LGALS16A8MUM7 142 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 EIF3CLB5ME19 914 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 KIR2DS3K7RE56 304 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CHUKO15111 745 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ZW10O43264 779 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 GRID2O43424 1007 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 MFSD11O43934 449 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PRPSAP2O60256 369 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 VPS4BO75351 444 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 MTX2O75431 263 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CBX6O95503 412 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 HLA-DQB2P05538 268 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PIRTP0C851 137 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 EBLN1P0CF75 366 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF30P17039 623 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 NELFEP18615 380 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 NFKBIAP25963 317 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 HNRNPH3P31942 346 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 HSPA9P38646 679 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 GARSP41250 739 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CAPZBP47756 277 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PPM1FP49593 454 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CCL11P51671 97 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ARSEP51690 589 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PGDP52209 483 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 UBE2HP62256 183 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SLC25A11Q02978 314 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SLC10A2Q12908 348 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 GPS2Q13227 327 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 GPR18Q14330 331 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 IL11RAQ14626 422 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 KIR2DS5Q14953 304 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 UGT8Q16880 541 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms