RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ERVK13-1Q9NX77 482 aa17.26■□□□□ 0.35
CCM2-207ENST00000475551 SIRT5Q9NXA8 310 aa17.26■□□□□ 0.35
CCM2-207ENST00000475551 PAQR5Q9NXK6 330 aaPredicted RBP17.26■□□□□ 0.35
CCM2-207ENST00000475551 SPASTQ9UBP0 616 aa17.26■□□□□ 0.35
CCM2-207ENST00000475551 CFL2Q9Y281 166 aa17.26■□□□□ 0.35
CCM2-207ENST00000475551 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 A0A075B6Q4 140 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 SLITRK5O94991 958 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 DIRAS1O95057 198 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 CA5AP35218 305 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 RPS5P46782 204 aaKnown RBP17.25■□□□□ 0.35
CCM2-207ENST00000475551 CDKN1CP49918 316 aaPredicted RBP17.25■□□□□ 0.35
CCM2-207ENST00000475551 CLCN4P51793 760 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 P2RX3P56373 397 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 OLR1P78380 273 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 VLDLRP98155 873 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 DUSP7Q16829 419 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 TBRG1Q3YBR2 411 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 USP39Q53GS9 565 aaKnown RBP17.25■□□□□ 0.35
CCM2-207ENST00000475551 ARMCX4Q5H9R4 360 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 RFPL4BQ6ZWI9 263 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 SLC39A13Q96H72 371 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 CEP19Q96LK0 163 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 CHCHD6Q9BRQ6 235 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 KATNBL1Q9H079 304 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 REEP1Q9H902 201 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 LRTM1Q9HBL6 345 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 THUMPD1Q9NXG2 353 aaKnown RBP17.25■□□□□ 0.35
CCM2-207ENST00000475551 RPS6KA6Q9UK32 745 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 DPM1O60762 260 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 CRYZL1O95825 349 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 ALDH1A1P00352 501 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 YES1P07947 543 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 ADORA3P0DMS8 318 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 PTPN6P29350 595 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 CA8P35219 290 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 PRIM2P49643 509 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 HMGCS1Q01581 520 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 ZNF792Q3KQV3 632 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 INO80DQ53TQ3 878 aaPredicted RBP17.25■□□□□ 0.35
CCM2-207ENST00000475551 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
CCM2-207ENST00000475551 ZSWIM9Q86XI8 627 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 REM2Q8IYK8 340 aaPredicted RBP17.25■□□□□ 0.35
CCM2-207ENST00000475551 CYP4Z2PQ8N1L4 340 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 HCAR2Q8TDS4 363 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 CLIP3Q96DZ5 547 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 NEDD4LQ96PU5 975 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 PKMYT1Q99640 499 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 NMUR1Q9HB89 426 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 TLR6Q9Y2C9 796 aa17.25■□□□□ 0.35
CCM2-207ENST00000475551 IGLV3-10A0A075B6K4 115 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.24■□□□□ 0.35
CCM2-207ENST00000475551 PLK4O00444 970 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 OR1I1O60431 355 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 WDR47O94967 919 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 C9P02748 559 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 HNF4AP41235 474 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 PXNP49023 591 aaPredicted RBP17.24■□□□□ 0.35
CCM2-207ENST00000475551 TTPAP49638 278 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 ITGA1P56199 1179 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 SERINC3Q13530 473 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 TAF1AQ15573 450 aaPredicted RBP17.24■□□□□ 0.35
CCM2-207ENST00000475551 TIGD5Q53EQ6 642 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 MS4A13Q5J8X5 152 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 ZNF551Q7Z340 670 aaPredicted RBP17.24■□□□□ 0.35
CCM2-207ENST00000475551 ZNF438Q7Z4V0 828 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 SERPINA11Q86U17 422 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 OR8H2Q8N162 312 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 SUN5Q8TC36 379 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 ELMO1Q92556 727 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 CRELD1Q96HD1 420 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 C3orf14Q9HBI5 128 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 AASDHPPTQ9NRN7 309 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 PLSCR3Q9NRY6 295 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 CCRL2O00421 344 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 CYP2A7P20853 494 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 GGT2P36268 569 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 RFX2P48378 723 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 ZNF235Q14590 738 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 ADAMTSL2Q86TH1 951 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 NOXA1Q86UR1 476 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 PIANPQ8IYJ0 282 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 JPH3Q8WXH2 748 aaPredicted RBP17.24■□□□□ 0.35
CCM2-207ENST00000475551 TTYH2Q9BSA4 534 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 INPP5KQ9BT40 448 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 COMMD10Q9Y6G5 202 aa17.24■□□□□ 0.35
CCM2-207ENST00000475551 MEIOCA2RUB1 952 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 A8MV72 311 aaPredicted RBP17.23■□□□□ 0.35
CCM2-207ENST00000475551 E5RI56 91 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 CTDSP2O14595 271 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 KIAA0513O60268 411 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 RAMP2O60895 175 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 VIPP01282 170 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 THP07101 528 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 RRM2P31350 389 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 S100A3P33764 101 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 TEKQ02763 1124 aa17.23■□□□□ 0.35
CCM2-207ENST00000475551 PSAPL1Q6NUJ1 521 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms