RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 LY6DQ14210 128 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 CSHL1Q14406 222 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 CTSL3PQ5NE16 218 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 LRRC8EQ6NSJ5 796 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 IRGCQ6NXR0 463 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 DUS1LQ6P1R4 473 aaKnown RBP15.13■□□□□ 0.01
CPSF3-203ENST00000475482 RGS9BPQ6ZS82 235 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 CENPLQ8N0S6 344 aaPredicted RBP15.13■□□□□ 0.01
CPSF3-203ENST00000475482 IL22RA1Q8N6P7 574 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 ZSCAN1Q8NBB4 408 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 PPP1R14CQ8TAE6 165 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 KCTD4Q8WVF5 259 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 INPP5DQ92835 1189 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 CCDC126Q96EE4 140 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 MED8Q96G25 268 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 SLC45A3Q96JT2 553 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 GPR21Q99679 349 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 MRPL46Q9H2W6 279 aaKnown RBP15.13■□□□□ 0.01
CPSF3-203ENST00000475482 TRIT1Q9H3H1 467 aaKnown RBP15.13■□□□□ 0.01
CPSF3-203ENST00000475482 TMEM216Q9P0N5 145 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 DHRS7Q9Y394 339 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 EIF3FO00303 357 aaPredicted RBP15.12■□□□□ 0.01
CPSF3-203ENST00000475482 NIPSNAP2O75323 286 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 RASSF9O75901 435 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 WISP3O95389 354 aaPredicted RBP15.12■□□□□ 0.01
CPSF3-203ENST00000475482 BPGMP07738 259 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 VIMP08670 466 aaKnown RBP15.12■□□□□ 0.01
CPSF3-203ENST00000475482 MYL2P10916 166 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 CPA3P15088 417 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 NDUFS1P28331 727 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 ZNF460Q14592 562 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 TERF2Q15554 542 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 FAM92BQ6ZTR7 304 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 KMT5CQ86Y97 462 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 CARFQ8N187 725 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 PLD6Q8N2A8 252 aaKnown RBP15.12■□□□□ 0.01
CPSF3-203ENST00000475482 CLDN19Q8N6F1 224 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 EXD3Q8N9H8 876 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 NXNL1Q96CM4 212 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 OR6C1Q96RD1 312 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 MAP3K3Q99759 626 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 DERL2Q9GZP9 239 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 MANSC1Q9H8J5 431 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 LATS2Q9NRM7 1088 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 COPG2Q9UBF2 871 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 HEBP2Q9Y5Z4 205 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 PRSS21Q9Y6M0 314 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 COLEC10Q9Y6Z7 277 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 BOD1L1Q8NFC6 3051 aa15.12■□□□□ 0.01
CPSF3-203ENST00000475482 BSNQ9UPA5 3926 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 LOC101059948A0A1B0GTJ6 334 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 TLCD2A6NGC4 264 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 TERTO14746 1132 aaKnown RBP15.11■□□□□ 0.01
CPSF3-203ENST00000475482 KLF11O14901 512 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 CBSLP0DN79 551 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 ZNF28P17035 718 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 PDHA2P29803 388 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 CBSP35520 551 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 CLCN7P51798 805 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 FOXM1Q08050 763 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 PLCL1Q15111 1095 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 TBR1Q16650 682 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.11■□□□□ 0.01
CPSF3-203ENST00000475482 CRTC2Q53ET0 693 aaPredicted RBP15.11■□□□□ 0.01
CPSF3-203ENST00000475482 C16orf46Q6P387 395 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 OTOAQ7RTW8 1153 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 CPLX4Q7Z7G2 160 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 OOSP2Q86WS3 158 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 D2HGDHQ8N465 521 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 ESX1Q8N693 406 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 RHEBL1Q8TAI7 183 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 CD200R1Q8TD46 325 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 EXTL1Q92935 676 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 PDLIM5Q96HC4 596 aaKnown RBP15.11■□□□□ 0.01
CPSF3-203ENST00000475482 FCRL4Q96PJ5 515 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 TWSG1Q9GZX9 223 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 TFB2MQ9H5Q4 396 aaKnown RBP15.11■□□□□ 0.01
CPSF3-203ENST00000475482 IGSF5Q9NSI5 407 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 WDR70Q9NW82 654 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 HRASLS2Q9NWW9 162 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 EMCNQ9ULC0 261 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 TMCO1Q9UM00 188 aa15.11■□□□□ 0.01
CPSF3-203ENST00000475482 WDR91A4D1P6 747 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 TCP11X1B4DZS4 312 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 ENO3P13929 434 aaPredicted RBP15.1■□□□□ 0.01
CPSF3-203ENST00000475482 FOLR1P15328 257 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 GRK2P25098 689 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 ACADLP28330 430 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 STAT5AP42229 794 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 GLRBP48167 497 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 CYP4F2P78329 520 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 TIAL1Q01085 375 aaKnown RBP eCLIP15.1■□□□□ 0.01
CPSF3-203ENST00000475482 PAQR3Q6TCH7 311 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 ZYG11AQ6WRX3 759 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 BPHLQ86WA6 291 aaPredicted RBP15.1■□□□□ 0.01
CPSF3-203ENST00000475482 SLC22A9Q8IVM8 553 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 ZBTB2Q8N680 514 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 STAG3L4Q8TBR4 150 aa15.1■□□□□ 0.01
CPSF3-203ENST00000475482 ZNF75CPQ92670 426 aaPredicted RBP15.1■□□□□ 0.01
CPSF3-203ENST00000475482 GPR78Q96P69 363 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms