RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 GEMIN8Q9NWZ8 242 aaKnown RBP23.04■■□□□ 1.28
CPNE1-223ENST00000475146 ADAMTS6Q9UKP5 1117 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 KLK4Q9Y5K2 254 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 A0A0J9YVX5 310 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 E7ENX8 843 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 SAT1P21673 171 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 IMPA1P29218 277 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 SSTR1P30872 391 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 VSX2P58304 361 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-223ENST00000475146 IL2P60568 153 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 DCDP81605 110 aaKnown RBP23.03■■□□□ 1.28
CPNE1-223ENST00000475146 NFKB2Q00653 900 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 CAV1Q03135 178 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 TAP2Q03519 686 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 KCNAB2Q13303 367 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 UGT8Q16880 541 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 TCTE1Q5JU00 501 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 ICE2Q659A1 982 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 C8orf74Q6P047 294 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 SLC26A11Q86WA9 606 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 ZC3HC1Q86WB0 502 aaKnown RBP23.03■■□□□ 1.28
CPNE1-223ENST00000475146 TTC29Q8NA56 475 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-223ENST00000475146 GBP5Q96PP8 586 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 C17orf62Q9BQA9 187 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 STARD5Q9NSY2 213 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 NSMCE4AQ9NXX6 385 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 NDOR1Q9UHB4 597 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 GPN3Q9UHW5 284 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-223ENST00000475146 TCFL5Q9UL49 500 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 MAN2B2Q9Y2E5 1009 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 PADI2Q9Y2J8 665 aa23.03■■□□□ 1.28
CPNE1-223ENST00000475146 OR2A25A4D2G3 310 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 PABPN1LA6NDY0 278 aaKnown RBP23.02■■□□□ 1.28
CPNE1-223ENST00000475146 CAPN1P07384 714 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 ALAS2P22557 587 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 ARSFP54793 590 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 NFATC3Q12968 1075 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 GRM7Q14831 915 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 SLC9A5Q14940 896 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 WHAMMP3Q1A5X7 153 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 FAM69BQ5VUD6 431 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 MLIPQ5VWP3 458 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 RNF44Q7L0R7 432 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 CCDC25Q86WR0 208 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 PARVBQ9HBI1 364 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 STOX2Q9P2F5 926 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-223ENST00000475146 IFT80Q9P2H3 777 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-223ENST00000475146 ANKMY1Q9P2S6 941 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 PDE10AQ9Y233 779 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 KCNMB2Q9Y691 235 aa23.02■■□□□ 1.28
CPNE1-223ENST00000475146 FAM95CA0A1B0GW59 222 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 SLC16A5O15375 505 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 PIAS1O75925 651 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 EIF2S1P05198 315 aaKnown RBP23.01■■□□□ 1.27
CPNE1-223ENST00000475146 SLC7A5Q01650 507 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 PRDX1Q06830 199 aaKnown RBP23.01■■□□□ 1.27
CPNE1-223ENST00000475146 TRADDQ15628 312 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 FRMPD2BQ6IN97 320 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 MBOAT1Q6ZNC8 495 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 TTLL10Q6ZVT0 673 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 ADCK2Q7Z695 626 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 FBXO25Q8TCJ0 367 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 CDKL2Q92772 493 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 CCDC138Q96M89 665 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 ZFYVE21Q9BQ24 234 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 PLCD4Q9BRC7 762 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 DHRS4Q9BTZ2 278 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 CCDC177Q9NQR7 707 aaPredicted RBP23.01■■□□□ 1.27
CPNE1-223ENST00000475146 CUTCQ9NTM9 273 aa23.01■■□□□ 1.27
CPNE1-223ENST00000475146 UTP6Q9NYH9 597 aaKnown RBP23.01■■□□□ 1.27
CPNE1-223ENST00000475146 SEC16AO15027 2179 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 A0A1B0GX78 115 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 SRPX2O60687 465 aaPredicted RBP23■■□□□ 1.27
CPNE1-223ENST00000475146 TSPAN12O95859 305 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 HIST1H2AGP0C0S8 130 aaPredicted RBP23■■□□□ 1.27
CPNE1-223ENST00000475146 HIST1H2ADP20671 130 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 TBPL1P62380 186 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 ABATP80404 500 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 NKAIN1Q4KMZ8 207 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 WASHC2DQ5SRD0 308 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 LRRC56Q8IYG6 542 aaPredicted RBP23■■□□□ 1.27
CPNE1-223ENST00000475146 THAP4Q8WY91 577 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 HIST1H2AHQ96KK5 128 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 ZNF285Q96NJ3 590 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 HIST1H2AJQ99878 128 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 H2AFJQ9BTM1 129 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 RHOJQ9H4E5 214 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 SMYD2Q9NRG4 433 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 TXNDC16Q9P2K2 825 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 TUBD1Q9UJT1 453 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 ATMQ13315 3056 aa23■■□□□ 1.27
CPNE1-223ENST00000475146 LOC105369274A0A096LPK9 316 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 IGKV1-8A0A0C4DH67 115 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 LOC102723532A0A0G2JNH3 316 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 ESYT3A0FGR9 886 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 PHKG1Q16816 387 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 YOD1Q5VVQ6 348 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-223ENST00000475146 PRAMEF13Q5VWM6 474 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 ZDHHC24Q6UX98 284 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 PAQR7Q86WK9 346 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms