RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 DPH7Q9BTV6 452 aa20.25■□□□□ 0.83
TRA2A-204ENST00000474586 SLC6A20Q9NP91 592 aa20.25■□□□□ 0.83
TRA2A-204ENST00000474586 B3GNT3Q9Y2A9 372 aa20.25■□□□□ 0.83
TRA2A-204ENST00000474586 HS3ST3B1Q9Y662 390 aa20.25■□□□□ 0.83
TRA2A-204ENST00000474586 UTP20O75691 2785 aaKnown RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 USP9YO00507 2555 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 RP1L1Q8IWN7 2480 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 OR2A25A4D2G3 310 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 CTAGE9A4FU28 777 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 SOCS6O14544 535 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 KLHL41O60662 606 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 PSIP1O75475 530 aaKnown RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 AGFG2O95081 481 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 MLNP12872 115 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 ITGA3P26006 1051 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 CMPK1P30085 196 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 CLCN7P51798 805 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 AIMP2Q13155 320 aaKnown RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 MRPL49Q13405 166 aaKnown RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 TSTA3Q13630 321 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 THOC5Q13769 683 aaKnown RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 ARMC3Q5W041 872 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 IGFL3Q6UXB1 125 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 RNF44Q7L0R7 432 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 MCUQ8NE86 351 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 SMPDL3AQ92484 453 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 NACC2Q96BF6 587 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 PBKQ96KB5 322 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 PKP4Q99569 1192 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 SLC30A3Q99726 388 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 LRRC4CQ9HCJ2 640 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 FBXO6Q9NRD1 293 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 INTS10Q9NVR2 710 aaKnown RBP20.24■□□□□ 0.83
TRA2A-204ENST00000474586 VPS9D1Q9Y2B5 631 aa20.24■□□□□ 0.83
TRA2A-204ENST00000474586 MAGEB16A2A368 324 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 MYO1CO00159 1063 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 USP1O94782 785 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 IPO13O94829 963 aaKnown RBP20.23■□□□□ 0.83
TRA2A-204ENST00000474586 ERGP11308 486 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 RPA3P35244 121 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-204ENST00000474586 CTBP1Q13363 440 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 NUP210LQ5VU65 1888 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 KIRREL2Q6UWL6 708 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 DENND6AQ8IWF6 608 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 REXO1L1PQ8IX06 675 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 IQCKQ8N0W5 287 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 ZADH2Q8N4Q0 377 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 CISD2Q8N5K1 135 aaKnown RBP20.23■□□□□ 0.83
TRA2A-204ENST00000474586 SNRNP40Q96DI7 357 aaKnown RBP20.23■□□□□ 0.83
TRA2A-204ENST00000474586 SERPINB12Q96P63 405 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 ZFYVE21Q9BQ24 234 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 XAB2Q9HCS7 855 aaKnown RBP20.23■□□□□ 0.83
TRA2A-204ENST00000474586 ZNF304Q9HCX3 659 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 FAM114A2Q9NRY5 505 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 NXT1Q9UKK6 140 aaKnown RBP20.23■□□□□ 0.83
TRA2A-204ENST00000474586 NEU2Q9Y3R4 380 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 JRKLQ9Y4A0 524 aa20.23■□□□□ 0.83
TRA2A-204ENST00000474586 PCM1Q15154 2024 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 ZCWPW2A0A1B0GU75 182 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 VSTM2BA6NLU5 285 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 NRDCO43847 1150 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 SEMA7AO75326 666 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 CATP04040 527 aaKnown RBP20.22■□□□□ 0.83
TRA2A-204ENST00000474586 VARSP26640 1264 aaKnown RBP20.22■□□□□ 0.83
TRA2A-204ENST00000474586 CUL1Q13616 776 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 RBBP7Q16576 425 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 EIF2S3LQ2VIR3 472 aaKnown RBP20.22■□□□□ 0.83
TRA2A-204ENST00000474586 PRAMEF13Q5VWM6 474 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 ZNF549Q6P9A3 640 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 CCDC137Q6PK04 289 aaKnown RBP20.22■□□□□ 0.83
TRA2A-204ENST00000474586 PARP9Q8IXQ6 854 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 PRSS58Q8IYP2 241 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 AGGF1Q8N302 714 aaeCLIP20.22■□□□□ 0.832e-25■■■□□ 18.3
TRA2A-204ENST00000474586 GIMAP7Q8NHV1 300 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 INPP5DQ92835 1189 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 SLC29A3Q9BZD2 475 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 ILKAPQ9H0C8 392 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-204ENST00000474586 SYNPO2LQ9H987 977 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 MRPS30Q9NP92 439 aaKnown RBP20.22■□□□□ 0.83
TRA2A-204ENST00000474586 SEMA3GQ9NS98 782 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 ASF1BQ9NVP2 202 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 MED16Q9Y2X0 877 aa20.22■□□□□ 0.83
TRA2A-204ENST00000474586 H0YGG7 62 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 KIF5CO60282 957 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 ERVK-10P10266 1014 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 PNLIPRP1P54315 467 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 ARF3P61204 181 aaPredicted RBP20.21■□□□□ 0.83
TRA2A-204ENST00000474586 ARHGAP19Q14CB8 494 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 NAA25Q14CX7 972 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 CYP1B1Q16678 543 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 PRTGQ2VWP7 1150 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 TTLL9Q3SXZ7 439 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 PRMT9Q6P2P2 845 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 PPFIBP2Q8ND30 876 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 STT3BQ8TCJ2 826 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 TM9SF4Q92544 642 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 C10orf90Q96M02 699 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 PLCD4Q9BRC7 762 aa20.21■□□□□ 0.83
TRA2A-204ENST00000474586 MESP1Q9BRJ9 268 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms