RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 MAGEB17A8MXT2 336 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 ZW10O43264 779 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SUV39H1O43463 412 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 UGDHO60701 494 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CCNKO75909 580 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CDK1P06493 297 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 DDX5P17844 614 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 GPX2P18283 190 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 NR4A1P22736 598 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 GGT2P36268 569 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 ATP5C1P36542 298 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 MAPK9P45984 424 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 MAP2K4P45985 399 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 C21orf58P58505 322 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CDC42P60953 191 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 NCS1P62166 190 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 RPP38P78345 283 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 KCNC3Q14003 757 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 PTPRCAPQ14761 206 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 PTGR1Q14914 329 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 C10orf62Q5T681 223 aaPredicted RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 AGAP6Q5VW22 663 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 TMEM236Q5W0B7 351 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 DNAJC14Q6Y2X3 702 aaPredicted RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 AHSA2Q719I0 299 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SLC46A3Q7Z3Q1 461 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 GALNT5Q7Z7M9 940 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SERINC5Q86VE9 423 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 HEATR4Q86WZ0 1026 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 SLC44A2Q8IWA5 706 aaPredicted RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 C1orf52Q8N6N3 182 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 AGAP4Q96P64 663 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 HOXD1Q9GZZ0 328 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 RMI1Q9H9A7 625 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CARS2Q9HA77 564 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 ZFP14Q9HCL3 533 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 IMPAD1Q9NX62 359 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 THUMPD1Q9NXG2 353 aaKnown RBP5.96□□□□□ -1.46
HERC4-209ENST00000473533 IL17CQ9P0M4 197 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 PSORS1C1Q9UIG5 152 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 CRLS1Q9UJA2 301 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 TRAPPC4Q9Y296 219 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 PADI2Q9Y2J8 665 aa5.96□□□□□ -1.46
HERC4-209ENST00000473533 TDRD15B5MCY1 1934 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 CLIC1O00299 241 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 TBX1O43435 398 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 DUSP11O75319 330 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 LATS1O95835 1130 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 COL6A1P12109 1028 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PFKLP17858 780 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 ALOX12P18054 663 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PRKACGP22612 351 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 TGFBR2P37173 567 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CASP3P42574 277 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 LSM3P62310 102 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 YBX1P67809 324 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 RUNX1T1Q06455 604 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PIGFQ07326 219 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CACNB2Q08289 660 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 RBBP4Q09028 425 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 MTAPQ13126 283 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 DSC3Q14574 896 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CTXN3Q4LDR2 81 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 ZCCHC8Q6NZY4 707 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 DOK6Q6PKX4 331 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CYP4Z1Q86W10 505 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 MSRB3Q8IXL7 192 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CBARPQ8N350 705 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 CXorf40BQ96DE9 158 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 RPL10LQ96L21 214 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 Q96MT0 163 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PANX1Q96RD7 426 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 SIGLEC11Q96RL6 698 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 MAPKAP1Q9BPZ7 522 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 APOL5Q9BWW9 433 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CIPCQ9C0C6 399 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CWH43Q9H720 699 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 GPBP1L1Q9HC44 474 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 NEK6Q9HC98 313 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PADI3Q9ULW8 664 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 RUVBL1Q9Y265 456 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 U3KQV3 271 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 FPGTO14772 594 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 TLR5O60602 858 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CYP2A7P20853 494 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 GGT5P36269 586 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 RPS5P46782 204 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 MASP1P48740 699 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 UGT2B15P54855 530 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 AP1S2P56377 157 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PLIN5Q00G26 463 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 MGAT3Q09327 533 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 STARD3Q14849 445 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 CLPPQ16740 277 aaPredicted RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 PAN2Q504Q3 1202 aaKnown RBP5.95□□□□□ -1.46
HERC4-209ENST00000473533 GNASQ5JWF2 1037 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 MORN1Q5T089 497 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 NCEH1Q6PIU2 408 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 SYT12Q8IV01 421 aa5.95□□□□□ -1.46
HERC4-209ENST00000473533 PIANPQ8IYJ0 282 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms