RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ODF2Q5BJF6 829 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TOR2AQ5JU69 321 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 CCDC183Q5T5S1 534 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 HENMT1Q5T8I9 393 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 IRAK1BP1Q5VVH5 260 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 LYPLAL1Q5VWZ2 237 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 NKAIN2Q5VXU1 208 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 IZUMO3Q5VZ72 239 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PAPD7Q5XG87 772 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 ARMC6Q6NXE6 501 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 DPY19L2P1Q6NXN4 242 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 IYDQ6PHW0 289 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SASS6Q6UVJ0 657 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 MED25Q71SY5 747 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 MARK2Q7KZI7 788 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 BZW1Q7L1Q6 419 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 DOK3Q7L591 496 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 CHST15Q7LFX5 561 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 TMPRSS9Q7Z410 1059 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TECPR1Q7Z6L1 1165 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 OOSP2Q86WS3 158 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 VSIG1Q86XK7 387 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 RAB43Q86YS6 212 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 GLB1L2Q8IW92 636 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ARHGAP12Q8IWW6 846 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 RHOT1Q8IXI2 618 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 IQCKQ8N0W5 287 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SLC34A3Q8N130 599 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TRAM1L1Q8N609 369 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TEX26Q8N6G2 289 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 NPWQ8N729 165 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SIDT2Q8NBJ9 832 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 CCL4L1Q8NHW4 92 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SLC35B2Q8TB61 432 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 DTX3LQ8TDB6 740 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 DENND1AQ8TEH3 1009 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ZFPM2Q8WW38 1151 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 CPT1BQ92523 772 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 HSPH1Q92598 858 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PNPLA2Q96AD5 504 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 NACC2Q96BF6 587 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 LRFN5Q96NI6 719 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TGM7Q96PF1 710 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PPP1R2P1Q96PQ5 205 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 CSPG4P5Q96PW8 444 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 VPS35Q96QK1 796 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 OR6C1Q96RD1 312 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 MNTQ99583 582 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SLC25A23Q9BV35 468 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 MLPHQ9BV36 600 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 TUBB2BQ9BVA1 445 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SLC7A5P2Q9GIP4 190 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ABCG8Q9H221 673 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TRABDQ9H4I3 376 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ACTL8Q9H568 366 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 VPS37BQ9H9H4 285 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PCDH9Q9HC56 1237 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 NT5MQ9NPB1 228 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 SLAMF7Q9NQ25 335 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 LHX9Q9NQ69 397 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 ZNF71Q9NQZ8 489 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 OCIAD1Q9NX40 245 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 HACD3Q9P035 362 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 PLEKHB1Q9UF11 243 aaPredicted RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 LIMA1Q9UHB6 759 aaKnown RBP3.42□□□□□ -1.86
XRN1-209ENST00000472625 PCSK1NQ9UHG2 260 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TP53TG5Q9Y2B4 290 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 CHST2Q9Y4C5 530 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 HEBP2Q9Y5Z4 205 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 TEX15Q9BXT5 2789 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 CSMD1Q96PZ7 3565 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 NOTCH2Q04721 2471 aa3.42□□□□□ -1.86
XRN1-209ENST00000472625 USP9YO00507 2555 aaPredicted RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 A0A087X1B8 175 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 LOC101059948A0A1B0GTJ6 334 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 HEATR9A2RTY3 570 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SMTNL1A8MU46 457 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 A8MU76 341 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 A8MX80 341 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ZNF487B1APH4 448 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ANKRD66B4E2M5 251 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 F8W8V4 182 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CHUKO15111 745 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SNX2O60749 519 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 DNAJC6O75061 913 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 KATNA1O75449 491 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SPAG6O75602 509 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SCRG1O75711 98 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CDK14O94921 469 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SLC25A14O95258 325 aaPredicted RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 ZBTB11O95625 1053 aaPredicted RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 PEX11BO96011 259 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 JCHAINP01591 159 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 FTLP02792 175 aaPredicted RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 RAB40ALP0C0E4 278 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 RALBP11234 206 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CTPS1P17812 591 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 NELFEP18615 380 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 WT1P19544 449 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms