RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 C8orf89P0DMQ9 161 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 KRT5P13647 590 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 CTSSP25774 331 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 OPRM1P35372 400 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 TIMP3P35625 211 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 FLT3P36888 993 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 YLPM1P49750 1951 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 PAPOLAP51003 745 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 RENBPP51606 427 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 ATP11AP98196 1134 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 AMPD3Q01432 767 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 GTF2H3Q13889 308 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 MEA1Q16626 185 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 YOD1Q5VVQ6 348 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 LYPD8Q6UX82 237 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 DNAJC14Q6Y2X3 702 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 EML6Q6ZMW3 1958 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 BNIPLQ7Z465 357 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 AMIGO1Q86WK6 493 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 RPS19BP1Q86WX3 136 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 ADGRF3Q8IZF5 1079 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 ZNF606Q8WXB4 792 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 MSI2Q96DH6 328 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 ZC3HAV1LQ96H79 300 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 PSKH2Q96QS6 385 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 NUDCD1Q96RS6 583 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 BHLHE41Q9C0J9 482 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 BLZF1Q9H2G9 400 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 LRRC19Q9H756 370 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 EXO5Q9H790 373 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 ACP6Q9NPH0 428 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 TRPC4Q9UBN4 977 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 FAM8A1Q9UBU6 413 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 FBXO2Q9UK22 296 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 LIPT1Q9Y234 373 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 DRG1Q9Y295 367 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 ARHGAP21Q5T5U3 1957 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 DNAH9Q9NYC9 4486 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 A0A0J9YY10 115 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 PLAUP00749 431 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TGFAP01135 160 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 SOD3P08294 240 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 CELA3AP09093 270 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 SLC35G4P0C7Q5 338 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 SNRPBP14678 240 aaKnown RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 CPOXP36551 454 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 MAGEA5P43359 124 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 HLCSP50747 726 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 CCR8P51685 355 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TAS2R50P59544 299 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 MAXP61244 160 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 LSM11P83369 360 aaKnown RBP eCLIP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 LGALS3BPQ08380 585 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 SLC10A7Q0GE19 358 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TMEM115Q12893 351 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 FOXL1Q12952 345 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 STK4Q13043 487 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 RFTN1Q14699 578 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 CDO1Q16878 200 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 FAM214AQ32MH5 1076 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 ACSF3Q4G176 576 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 PTPN20Q4JDL3 420 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 DCAF17Q5H9S7 520 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TCERG1LQ5VWI1 586 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 METRNLQ641Q3 311 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TRNP1Q6NT89 227 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 WDR59Q6PJI9 974 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 CLEC2AQ6UVW9 174 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 ARHGAP36Q6ZRI8 547 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 LANCL3Q6ZV70 420 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 RRAGAQ7L523 313 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 MDGA2Q7Z553 956 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 CPEB2Q7Z5Q1 589 aaKnown RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 SLC22A16Q86VW1 577 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 RAVER1Q8IY67 606 aaKnown RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 PYROXD2Q8N2H3 581 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 FBXW8Q8N3Y1 598 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 C1orf131Q8NDD1 294 aaKnown RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 OR10H5Q8NGA6 315 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 OR52E1Q8NGJ3 308 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 METTL21AQ8WXB1 218 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 RBM41Q96IZ5 413 aaKnown RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 MARK4Q96L34 752 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 RMDN2Q96LZ7 410 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TTC25Q96NG3 672 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 WWC2-AS2Q96NR7 200 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 OR2A14Q96R47 310 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 FERD3LQ96RJ6 166 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 C7orf25Q9BPX7 421 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 NUP85Q9BW27 656 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 GTPBP4Q9BZE4 634 aaKnown RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 SLC39A8Q9C0K1 460 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TRIM45Q9H8W5 580 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 BARX1Q9HBU1 254 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 DEPPQ9NTK1 212 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 C14orf105Q9NVL8 296 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 STOX2Q9P2F5 926 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-206ENST00000471968 SPRR3Q9UBC9 169 aa6.11□□□□□ -1.43
HDAC3-206ENST00000471968 TRHDEQ9UKU6 1024 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms