RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SYCE2Q6PIF2 218 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-207ENST00000470763 SLC7A6Q92536 515 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
NPHP4-207ENST00000470763 INPP5KQ9BT40 448 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 ABCG8Q9H221 673 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 ACOXLQ9NUZ1 547 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 MIOSQ9NXC5 875 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 GABRQQ9UN88 632 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 OR6C70A6NIJ9 312 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 IFRD1O00458 451 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-207ENST00000470763 NDUFS3O75489 264 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 FKBP9O95302 570 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 FPR1P21462 350 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 CBLP22681 906 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 MAGEA2P43356 314 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 NFE2Q16621 373 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-207ENST00000470763 GPAT3Q53EU6 434 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 ZNF648Q5T619 568 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-207ENST00000470763 MANEALQ5VSG8 457 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 GOLGA7Q7Z5G4 137 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 SENP8Q96LD8 212 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 SMIM14Q96QK8 99 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 CCDC32Q9BV29 185 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 C1QTNF3Q9BXJ4 246 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 PSORS1C1Q9UIG5 152 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 H3BRB1 525 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 SLITRK5O94991 958 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 CSF2P04141 144 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ITGB1P05556 798 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ITGA2P17301 1181 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 HOXB8P17481 243 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 IDH2P48735 452 aaKnown RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 SNRPD2P62316 118 aaKnown RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 C19orf57Q0VDD7 668 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 SUSD1Q6UWL2 747 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ZNF551Q7Z340 670 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 OR52E4Q8NGH9 312 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ANGPTL6Q8NI99 470 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 GPR151Q8TDV0 419 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 SEMA3CQ99985 751 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 IL1RAPQ9NPH3 570 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 OSER1Q9NX31 292 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 HS3ST4Q9Y661 456 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 A0A1W2PQ09 198 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 OR7A17O14581 309 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 MUSKO15146 869 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 KLK8O60259 260 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 TSPAN12O95859 305 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 CDKN2CP42773 168 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 CACNB2Q08289 660 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ARTNQ5T4W7 220 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 STX19Q8N4C7 294 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 CDKN2AIPNLQ96HQ2 116 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 DHRS9Q9BPW9 319 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 THUMPD1Q9NXG2 353 aaKnown RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 PCDHB5Q9Y5E4 795 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 IQCF5A8MTL0 148 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 TLR5O60602 858 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 MRPS14O60783 128 aaKnown RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 FABP3P05413 133 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 CDK1P06493 297 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 TGM4P49221 684 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 PTCHD3Q3KNS1 767 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 PAMR1Q6UXH9 720 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 NLRP8Q86W28 1048 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 FAM109AQ8N4B1 249 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 GPR150Q8NGU9 434 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ARRDC2Q8TBH0 407 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 CPPED1Q9BRF8 314 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 MKRN2Q9H000 416 aaKnown RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 EXOSC4Q9NPD3 245 aaKnown RBP13.38□□□□□ -0.27
NPHP4-207ENST00000470763 TMEM45AQ9NWC5 275 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 ITM2BQ9Y287 266 aa13.38□□□□□ -0.27
NPHP4-207ENST00000470763 GUCA1CO95843 209 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 HOXC13P31276 330 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 ETV6P41212 452 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 GZMMP51124 257 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 MED22Q15528 200 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 GNASQ5JWF2 1037 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 CALHM3Q86XJ0 350 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 DNAJC22Q8N4W6 341 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 MYDGFQ969H8 173 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 MTFMTQ96DP5 389 aaKnown RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 RIPOR3Q96MK2 946 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 OR5M11Q96RB7 305 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 C16orf70Q9BSU1 422 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 IPPKQ9H8X2 491 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 MAT2BQ9NZL9 334 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 HECAQ9UBI9 543 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 TRMT6Q9UJA5 497 aaKnown RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 CLCA1A8K7I4 914 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 OGNP20774 298 aaKnown RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 FAM189BP81408 668 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 ACVR1Q04771 509 aa13.37□□□□□ -0.27
NPHP4-207ENST00000470763 FOXD4Q12950 439 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-207ENST00000470763 TSTQ16762 297 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms