RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 OR2AG2A6NM03 316 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 FOXO6A8MYZ6 492 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 ZSCAN9O15535 394 aaPredicted RBP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 USP1O94782 785 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 TTC4O95801 387 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 HLA-DQB2P05538 268 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 GSTA1P08263 222 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 ALAS2P22557 587 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 PBLDP30039 288 aaPredicted RBP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 ARSFP54793 590 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 TAS2R40P59535 323 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 Q0VFX4 171 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 SF3A3Q12874 501 aaKnown RBP eCLIP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 ITGA9Q13797 1035 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 RBBP7Q16576 425 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 CCNG2Q16589 344 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 SLC5A12Q1EHB4 618 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 TNFAIP8L3Q5GJ75 292 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 ZNF449Q6P9G9 518 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 MEX3BQ6ZN04 569 aaKnown RBP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 CDHR3Q6ZTQ4 885 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 GSTA5Q7RTV2 222 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 PIGWQ7Z7B1 504 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 EXOC3L1Q86VI1 746 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 EID3Q8N140 333 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 RASGEF1AQ8N9B8 481 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 CCNYQ8ND76 341 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 OR2L2Q8NH16 312 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 CCT6BQ92526 530 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 HAS2Q92819 552 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 FKBP10Q96AY3 582 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 FERD3LQ96RJ6 166 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 OSBPL8Q9BZF1 889 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 CHRNA10Q9GZZ6 450 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 SPRTNQ9H040 489 aaPredicted RBP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 WDR54Q9H977 334 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 PCDH18Q9HCL0 1135 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 BPIFA1Q9NP55 256 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 SEMA3GQ9NS98 782 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 NKIRAS1Q9NYS0 192 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 DHCR7Q9UBM7 475 aaKnown RBP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 NXT1Q9UKK6 140 aaKnown RBP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 PCM1Q15154 2024 aa8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
SYNGAP1-205ENST00000470232 TMEM120BA0PK00 339 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 C19orf84I3L1E1 186 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 IFRD1O00458 451 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 BTN3A1O00481 513 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 SOCS6O14544 535 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 NDC80O14777 642 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 SLC19A2O60779 497 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 MT-CYBP00156 380 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 MMP2P08253 660 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 PIRTP0C851 137 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 FDXRP22570 491 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 IVDP26440 423 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 IL1R2P27930 398 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 AKT1P31749 480 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 HMGCLP35914 325 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 TNFSF10P50591 281 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 CTSCP53634 463 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 CSNK1G2P78368 415 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 ADORA2A-AS1P86434 159 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 SLC9A5Q14940 896 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 PAFAH1B3Q15102 231 aaKnown RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 SNCBQ16143 134 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 HADHQ16836 314 aaKnown RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 FNBP1LQ5T0N5 605 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 SWT1Q5T5J6 900 aaKnown RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 KIRREL2Q6UWL6 708 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 OVCH1Q7RTY7 1134 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 AMIGO1Q86WK6 493 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 TGIF2LYQ8IUE0 185 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 KBTBD2Q8IY47 623 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 CFAP206Q8IYR0 622 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 RCOR2Q8IZ40 523 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 ZNF655Q8N720 491 aaPredicted RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 CCDC89Q8N998 374 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 C19orf47Q8N9M1 422 aaKnown RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 CCDC63Q8NA47 563 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 DDHD1Q8NEL9 900 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 CKAP2Q8WWK9 683 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 MAGED4Q96JG8 741 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 TAAR6Q96RI8 345 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 ENKD1Q9H0I2 346 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 TRABDQ9H4I3 376 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 TFB2MQ9H5Q4 396 aaKnown RBP8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 IL1RAPL1Q9NZN1 696 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 LGALS13Q9UHV8 139 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 TMPRSS11EQ9UL52 423 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 VPS9D1Q9Y2B5 631 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 NUP210LQ5VU65 1888 aa8.55□□□□□ -1.04
SYNGAP1-205ENST00000470232 C17orf113A0A1B0GUU1 675 aa8.54□□□□□ -1.04
SYNGAP1-205ENST00000470232 BTN3A3O00478 584 aa8.54□□□□□ -1.04
SYNGAP1-205ENST00000470232 DNALI1O14645 258 aaPredicted RBP8.54□□□□□ -1.04
SYNGAP1-205ENST00000470232 MFSD11O43934 449 aa8.54□□□□□ -1.04
SYNGAP1-205ENST00000470232 CNOT3O75175 753 aaKnown RBP8.54□□□□□ -1.04
SYNGAP1-205ENST00000470232 ALOX12BO75342 701 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms