RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 C10orf90Q96M02 699 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 GPATCH1Q9BRR8 931 aaKnown RBP11.37□□□□□ -0.59
LSM2-209ENST00000470083 UTP23Q9BRU9 249 aaKnown RBP11.37□□□□□ -0.59
LSM2-209ENST00000470083 FICDQ9BVA6 458 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 RASSF1Q9NS23 344 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 ZDHHC3Q9NYG2 299 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 AIPL1Q9NZN9 384 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.37□□□□□ -0.59
LSM2-209ENST00000470083 LRFN1Q9P244 771 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 TRPC4Q9UBN4 977 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 GNPTGQ9UJJ9 305 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 FAM169AQ9Y6X4 670 aa11.37□□□□□ -0.59
LSM2-209ENST00000470083 C5orf60A6NFR6 353 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 LRRC10BA6NIK2 292 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 APOL1O14791 398 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 PRPF4O43172 522 aaKnown RBP eCLIP11.36□□□□□ -0.59
LSM2-209ENST00000470083 CTSVO60911 334 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 CYP1A2P05177 515 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 TPOP07202 933 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 KDELR1P24390 212 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 HOXC12P31275 282 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 PTGER1P34995 402 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 TAS2R40P59535 323 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 YBX1P67809 324 aaKnown RBP11.36□□□□□ -0.59
LSM2-209ENST00000470083 MPP3Q13368 585 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 TAZQ16635 292 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 RNFT1Q5M7Z0 435 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 FCRLBQ6BAA4 426 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 PLAG1Q6DJT9 500 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 PAMR1Q6UXH9 720 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 NPNTQ6UXI9 565 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 CCDC71Q8IV32 467 aaPredicted RBP11.36□□□□□ -0.59
LSM2-209ENST00000470083 ZZZ3Q8IYH5 903 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 CPSF7Q8N684 471 aaKnown RBP11.36□□□□□ -0.59
LSM2-209ENST00000470083 CLDN19Q8N6F1 224 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 HORMAD2Q8N7B1 307 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 ACRBPQ8NEB7 543 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.36□□□□□ -0.59
LSM2-209ENST00000470083 ZUFSPQ96AP4 578 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 SEC16BQ96JE7 1060 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 FCRL5Q96RD9 977 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 OLFM1Q99784 485 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 MENTQ9BUN1 341 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 FSD1LQ9BXM9 530 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 TGIF2Q9GZN2 237 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 FAM96AQ9H5X1 160 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 ANKRD10Q9NXR5 420 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 ZC3H7BQ9UGR2 993 aaKnown RBP11.36□□□□□ -0.59
LSM2-209ENST00000470083 CDC14AQ9UNH5 594 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 TLN2Q9Y4G6 2542 aa11.36□□□□□ -0.59
LSM2-209ENST00000470083 HIVEP2P31629 2446 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 TARM1B6A8C7 271 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 FFAR3O14843 346 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 GPR42O15529 346 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 NEURL1O76050 574 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 SUN1O94901 812 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 PROSCO94903 275 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 FKBP9O95302 570 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 SP1P08047 785 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 CD9P21926 228 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 ACRV1P26436 265 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 WASHC5Q12768 1159 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 FASTKQ14296 549 aaKnown RBP11.35□□□□□ -0.59
LSM2-209ENST00000470083 MEP1AQ16819 746 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 DEFB113Q30KQ7 82 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 GPR33Q49SQ1 333 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 FRMPD2BQ6IN97 320 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 SLC25A25Q6KCM7 469 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 APTXQ7Z2E3 356 aaKnown RBP11.35□□□□□ -0.59
LSM2-209ENST00000470083 VSIG1Q86XK7 387 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 MVB12AQ96EY5 273 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 C19orf43Q9BQ61 176 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 YIPF2Q9BWQ6 316 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 TP63Q9H3D4 680 aaPredicted RBP11.35□□□□□ -0.59
LSM2-209ENST00000470083 MKKSQ9NPJ1 570 aaPredicted RBP11.35□□□□□ -0.59
LSM2-209ENST00000470083 STOX2Q9P2F5 926 aaPredicted RBP11.35□□□□□ -0.59
LSM2-209ENST00000470083 KLK4Q9Y5K2 254 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 HCFC1P51610 2035 aa11.35□□□□□ -0.59
LSM2-209ENST00000470083 HRNRQ86YZ3 2850 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 LOC105369274A0A096LPK9 316 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 TRBV5-4A0A0C4DH59 114 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 LOC102723532A0A0G2JNH3 316 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 A0A1B0GTH9 108 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 LRRD1A4D1F6 860 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 SNRNP200O75643 2136 aaKnown RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 SEC24DO94855 1032 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 AP2A2O94973 939 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 C8orf89P0DMQ9 161 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 PCSK6P29122 969 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 SLC26A3P40879 764 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 ZNF140P52738 457 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 EFNA3P52797 238 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 EMP3P54852 163 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 DLX5P56178 289 aa11.34□□□□□ -0.59
LSM2-209ENST00000470083 PLOD1Q02809 727 aaPredicted RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 SF1Q15637 639 aaKnown RBP11.34□□□□□ -0.59
LSM2-209ENST00000470083 PRTGQ2VWP7 1150 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms