RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ATCAYQ86WG3 371 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 CCDC71Q8IV32 467 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 LAX1Q8IWV1 398 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 BBS7Q8IWZ6 715 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 PGBD3Q8N328 593 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 LINC00116Q8NCU8 138 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 SLC35F5Q8WV83 523 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 GGHQ92820 318 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 C12orf42Q96LP6 360 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ZNF599Q96NL3 588 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 SERPINB11Q96P15 392 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 SORCS2Q96PQ0 1159 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ASPNQ9BXN1 380 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 ASB7Q9H672 318 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 RASSF1Q9NS23 344 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 MED9Q9NWA0 146 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 MIOSQ9NXC5 875 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 FAM8A1Q9UBU6 413 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 POLLQ9UGP5 575 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 UTS2RQ9UKP6 389 aa8.8□□□□□ -1
SMARCE1-207ENST00000469334 SAMD4AQ9UPU9 718 aaKnown RBP8.8□□□□□ -1
SMARCE1-207ENST00000469334 A0A096LPI6 279 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 KRBOX1C9JBD0 128 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 PLA2G10O15496 165 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 DPM1O60762 260 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 ANXA9O76027 345 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 ARSBP15848 533 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 ZNF37AP17032 561 aaPredicted RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 PTBP1P26599 531 aaKnown RBP eCLIP8.79□□□□□ -12e-22■■■■■ 51.6
SMARCE1-207ENST00000469334 C21orf33P30042 268 aaPredicted RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 EVI2BP34910 448 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 NUP62P37198 522 aaPredicted RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 SLC19A1P41440 591 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 MAPKAPK2P49137 400 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 GMPSP49915 693 aaPredicted RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 DGKQP52824 942 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 ATXN1P54253 815 aaKnown RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 AIF1P55008 147 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 TCP10Q12799 353 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 BTN1A1Q13410 526 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 SEMA3AQ14563 771 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 VEPH1Q14D04 833 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 HSD17B12Q53GQ0 312 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 SOWAHCQ53LP3 525 aaPredicted RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 IGSF11Q5DX21 431 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 BICRALQ6AI39 1079 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 ESRP1Q6NXG1 681 aaKnown RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 MPZL3Q6UWV2 235 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 ZNF600Q6ZNG1 722 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 CFAP77Q6ZQR2 320 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 DPH6Q7L8W6 267 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 RRM2BQ7LG56 351 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 NLRP8Q86W28 1048 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 CAMKK1Q8N5S9 505 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 C1orf127Q8N9H9 656 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 OR5T2Q8NGG2 359 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 WDR48Q8TAF3 677 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 GPR152Q8TDT2 470 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 RADILQ96JH8 1075 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 MSLNLQ96KJ4 702 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 QRFPRQ96P65 431 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 TSEN34Q9BSV6 310 aaKnown RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 KATNAL1Q9BW62 490 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 TAPBPLQ9BX59 468 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 CDCA4Q9BXL8 241 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 MAGEB5Q9BZ81 275 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 MCOLN1Q9GZU1 580 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 NT5DC2Q9H857 520 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 HEXA-AS1Q9H8Q6 139 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 POPDC3Q9HBV1 291 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 MCCC2Q9HCC0 563 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 JPH1Q9HDC5 661 aaPredicted RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 PXMP2Q9NR77 195 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 VNN3Q9NY84 501 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 IKZF3Q9UKT9 509 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 RIMKLBQ9ULI2 386 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 GJA3Q9Y6H8 435 aa8.79□□□□□ -1
SMARCE1-207ENST00000469334 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
SMARCE1-207ENST00000469334 GBF1Q92538 1859 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 hCG_1807616A0A1W2PRN6 198 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 UBA6A0AVT1 1052 aaPredicted RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 PITPNM1O00562 1244 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SLC7A4O43246 635 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SH3BP5O60239 455 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 FGF18O76093 207 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SERPINA1P01009 418 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 PTHP01270 115 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 IFNA14P01570 189 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CSF2P04141 144 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 PROS1P07225 676 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CNPP09543 421 aaKnown RBP8.78□□□□□ -1
SMARCE1-207ENST00000469334 HLA-EP13747 358 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 SLC2A4P14672 509 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 PCSK2P16519 638 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 GGT2P36268 569 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 MAP2K6P52564 334 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 CYP4F2P78329 520 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 JAG1P78504 1218 aa8.78□□□□□ -1
SMARCE1-207ENST00000469334 HOXC5Q00444 222 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms