RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 MZB1Q8WU39 189 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 PMEPA1Q969W9 287 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 ALKBH8Q96BT7 664 aaKnown RBP11.5□□□□□ -0.57
VPS13D-204ENST00000469054 RHBDF1Q96CC6 855 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 MED8Q96G25 268 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 GPR78Q96P69 363 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 TEFMQ96QE5 360 aaKnown RBP11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CTRCQ99895 268 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 ZPBPQ9BS86 351 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 DDA1Q9BW61 102 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 SGPP1Q9BX95 441 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 ASPSCR1Q9BZE9 553 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 FAM60AQ9NP50 221 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 MRPS30Q9NP92 439 aaKnown RBP11.5□□□□□ -0.57
VPS13D-204ENST00000469054 FGF21Q9NSA1 209 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 ABCF3Q9NUQ8 709 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 RARRES3Q9UL19 164 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 RNF112Q9ULX5 631 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 KLHL20Q9Y2M5 609 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 B3GALT1Q9Y5Z6 326 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 NCF1BA6NI72 391 aaPredicted RBP11.49□□□□□ -0.57
VPS13D-204ENST00000469054 SMIM23A6NLE4 172 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 NCF1CA8MVU1 366 aaPredicted RBP11.49□□□□□ -0.57
VPS13D-204ENST00000469054 ERLIN1O75477 346 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 MSL3P1P0C860 447 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 FGF5P12034 268 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 NCF1P14598 390 aaPredicted RBP11.49□□□□□ -0.57
VPS13D-204ENST00000469054 NPPBP16860 134 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 SLC5A2P31639 672 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 GLRBP48167 497 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 YBX1P67809 324 aaKnown RBP11.49□□□□□ -0.57
VPS13D-204ENST00000469054 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 NAA25Q14CX7 972 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 GPR19Q15760 415 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 PTCHD3Q3KNS1 767 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 FCRL6Q6DN72 434 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 LCTLQ6UWM7 567 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 PPP1R3BQ86XI6 285 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 CYP4X1Q8N118 509 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 TCAIMQ8N3R3 496 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 DNAJC22Q8N4W6 341 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 PDPRQ8NCN5 879 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 ACMSDQ8TDX5 336 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 FGF11Q92914 225 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 PYCR2Q96C36 320 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 TSNARE1Q96NA8 513 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 ATOH8Q96SQ7 321 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 DPH7Q9BTV6 452 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 ROPN1BQ9BZX4 212 aaPredicted RBP11.49□□□□□ -0.57
VPS13D-204ENST00000469054 ROPN1Q9HAT0 212 aaPredicted RBP11.49□□□□□ -0.57
VPS13D-204ENST00000469054 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 ZNF358Q9NW07 568 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 EURLQ9NYK6 297 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 NUDT4Q9NZJ9 180 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 CD274Q9NZQ7 290 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 FOXJ2Q9P0K8 574 aa11.49□□□□□ -0.57
VPS13D-204ENST00000469054 IGKV1-8A0A0C4DH67 115 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 TLDC2A0PJX2 215 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 OR2A25A4D2G3 310 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 CCDC151A5D8V7 595 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 TMEM8BA6NDV4 472 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 SYCE1LA8MT33 242 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 TAPBPO15533 448 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 MT-ND3P03897 115 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 RBP1P09455 135 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 KRT15P19012 456 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 GABRA4P48169 554 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 TSNAXIP1Q2TAA8 658 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 ZNF425Q6IV72 752 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 C17orf64Q86WR6 236 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 RIBC1Q8N443 379 aaPredicted RBP11.48□□□□□ -0.57
VPS13D-204ENST00000469054 OR8K5Q8NH50 307 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 EXT2Q93063 718 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 ZNF501Q96CX3 271 aaPredicted RBP11.48□□□□□ -0.57
VPS13D-204ENST00000469054 FCRL4Q96PJ5 515 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 OR4K3Q96R72 315 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 PLCD4Q9BRC7 762 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 HAUS8Q9BT25 410 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 SLC6A20Q9NP91 592 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 PCMTD2Q9NV79 361 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 WWOXQ9NZC7 414 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 ANKMY1Q9P2S6 941 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 PTBP2Q9UKA9 531 aaKnown RBP11.48□□□□□ -0.57
VPS13D-204ENST00000469054 ACSL6Q9UKU0 697 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 SNX7Q9UNH6 387 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 PLCL2Q9UPR0 1127 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 PLAAQ9Y263 795 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 SLC22A14Q9Y267 594 aa11.48□□□□□ -0.57
VPS13D-204ENST00000469054 A0A1W2PPM1 405 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 SUPT3HB4E1H0 165 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 TMEM150CB9EJG8 249 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 H7BY64 318 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 GOLGA8RI6L899 631 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 UBXN8O00124 270 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 MAP2K7O14733 419 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 CTIFO43310 598 aaKnown RBP11.47□□□□□ -0.57
VPS13D-204ENST00000469054 HCRTR1O43613 425 aa11.47□□□□□ -0.57
VPS13D-204ENST00000469054 TLX3O43711 291 aaPredicted RBP11.47□□□□□ -0.57
VPS13D-204ENST00000469054 CTSVO60911 334 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms