RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 EBLN1P0CF75 366 aa16.9■□□□□ 0.3
RPL39-202ENST00000468844 ZCCHC8Q6NZY4 707 aaKnown RBP16.9■□□□□ 0.3
RPL39-202ENST00000468844 SETD7Q8WTS6 366 aaKnown RBP16.9■□□□□ 0.3
RPL39-202ENST00000468844 SH3KBP1Q96B97 665 aa16.9■□□□□ 0.3
RPL39-202ENST00000468844 NSRP1Q9H0G5 558 aaKnown RBP16.9■□□□□ 0.3
RPL39-202ENST00000468844 GPRC5BQ9NZH0 403 aa16.9■□□□□ 0.3
RPL39-202ENST00000468844 STK38LQ9Y2H1 464 aa16.9■□□□□ 0.3
RPL39-202ENST00000468844 RNF11Q9Y3C5 154 aa16.9■□□□□ 0.3
RPL39-202ENST00000468844 TRAF6Q9Y4K3 522 aa16.9■□□□□ 0.3
RPL39-202ENST00000468844 AZIN1O14977 448 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 PCDHGA12O60330 932 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 JUNP05412 331 aaKnown RBP16.89■□□□□ 0.29
RPL39-202ENST00000468844 COL5A1P20908 1838 aaPredicted RBP16.89■□□□□ 0.29
RPL39-202ENST00000468844 CHIT1Q13231 466 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 E2F2Q14209 437 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 CATSPEREQ5SY80 951 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 MAVSQ7Z434 540 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 MILR1Q7Z6M3 343 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 TMPRSS11BQ86T26 416 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 CDYL2Q8N8U2 506 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 SLC5A11Q8WWX8 675 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 ACTR8Q9H981 624 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 UCK1Q9HA47 277 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 FAM86C1Q9NVL1 165 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 DNAJC15Q9Y5T4 150 aa16.89■□□□□ 0.29
RPL39-202ENST00000468844 FAM221BA6H8Z2 402 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 MATN2O00339 956 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 ZNF195O14628 629 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 CLDN9O95484 217 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 CAPN1P07384 714 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 MYF5P13349 255 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 CD22P20273 847 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 SERPINB3P29508 390 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 PCDH1Q08174 1060 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 UGT3A2Q3SY77 523 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 KANK2Q63ZY3 851 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 ICE2Q659A1 982 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 WDR75Q8IWA0 830 aaKnown RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 CLYBLQ8N0X4 340 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 OR10G6Q8NH81 332 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 RSC1A1Q92681 617 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 ATOH1Q92858 354 aaPredicted RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 ELAC2Q9BQ52 826 aaKnown RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 HAUS8Q9BT25 410 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 TRIM55Q9BYV6 548 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 PCBD2Q9H0N5 130 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 DYRK1BQ9Y463 629 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 TIMM22Q9Y584 194 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 RNF215Q9Y6U7 377 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 PIPSLA2A3N6 862 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 OR6C74A6NCV1 312 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 LILRA5A6NI73 299 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 SIGLEC6O43699 453 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 NUDT21O43809 227 aaKnown RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 SNX3O60493 162 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 ZNF806P0C7X5 589 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 ALPPL2P10696 532 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 ATXN3P54252 364 aaPredicted RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 IRF8Q02556 426 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 BIRC2Q13490 618 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 SF3A2Q15428 464 aaKnown RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 GGTA1PQ4G0N0 100 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 XKR6Q5GH73 641 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 TCHHL1Q5QJ38 904 aaPredicted RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 SLCO4C1Q6ZQN7 724 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 MYLK4Q86YV6 388 aaPredicted RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 C10orf67Q8IYJ2 551 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 L3MBTL4Q8NA19 623 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 RFWD2Q8NHY2 731 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 FLVCR1-AS1Q8TAF5 88 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 GRAMD1AQ96CP6 724 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 APOLD1Q96LR9 279 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 SLC38A3Q99624 504 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 KCNK13Q9HB14 408 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 CUEDC1Q9NWM3 386 aaPredicted RBP16.88■□□□□ 0.29
RPL39-202ENST00000468844 LRIT1Q9P2V4 623 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 TRPS1Q9UHF7 1281 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 DCTN4Q9UJW0 460 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 PCDHB11Q9Y5F2 797 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 USH1CQ9Y6N9 552 aa16.88■□□□□ 0.29
RPL39-202ENST00000468844 CFAP54Q96N23 3096 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 IGKV1-8A0A0C4DH67 115 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 LY6G6EA0A0G2JKS1 128 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 UGDHO60701 494 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 SKAP2O75563 359 aaPredicted RBP16.87■□□□□ 0.29
RPL39-202ENST00000468844 SLC34A2O95436 690 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 TROVE2P10155 538 aaKnown RBP eCLIP16.87■□□□□ 0.29
RPL39-202ENST00000468844 UROSP10746 265 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 ALOX15P16050 662 aaPredicted RBP16.87■□□□□ 0.29
RPL39-202ENST00000468844 GLB1P16278 677 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 POLR2CP19387 275 aaPredicted RBP16.87■□□□□ 0.29
RPL39-202ENST00000468844 VARSP26640 1264 aaKnown RBP16.87■□□□□ 0.29
RPL39-202ENST00000468844 CORO7P57737 925 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 PRDX1Q06830 199 aaKnown RBP16.87■□□□□ 0.29
RPL39-202ENST00000468844 DOC2AQ14183 400 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 PDCD2Q16342 344 aaPredicted RBP16.87■□□□□ 0.29
RPL39-202ENST00000468844 PIGWQ7Z7B1 504 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 C17orf64Q86WR6 236 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 FAM20CQ8IXL6 584 aa16.87■□□□□ 0.29
RPL39-202ENST00000468844 OR2L3Q8NG85 312 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms