RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 MED27Q6P2C8 311 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 LCTLQ6UWM7 567 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 GCNT7Q6ZNI0 430 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 SYT13Q7L8C5 426 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 LRRC56Q8IYG6 542 aaPredicted RBP11.77□□□□□ -0.52
LAMP3-202ENST00000466939 SYNPOQ8N3V7 929 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 C2orf73Q8N5S3 287 aaPredicted RBP11.77□□□□□ -0.52
LAMP3-202ENST00000466939 PROKR1Q8TCW9 393 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 SETD7Q8WTS6 366 aaKnown RBP11.77□□□□□ -0.52
LAMP3-202ENST00000466939 OR1E3Q8WZA6 343 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 VPS33AQ96AX1 596 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 SH3KBP1Q96B97 665 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 HHIPQ96QV1 700 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 INSM2Q96T92 566 aaPredicted RBP11.77□□□□□ -0.52
LAMP3-202ENST00000466939 HAUS8Q9BT25 410 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 DPY30Q9C005 99 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 DCLRE1BQ9H816 532 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 SPAG4Q9NPE6 437 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 SH2B3Q9UQQ2 575 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 POMPQ9Y244 141 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 WDR37Q9Y2I8 494 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 PCDHGA11Q9Y5H2 935 aa11.77□□□□□ -0.52
LAMP3-202ENST00000466939 PRPS2P11908 318 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 BCKDHAP12694 445 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 HSD3B1P14060 373 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 NPPBP16860 134 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 JAK1P23458 1154 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 PRPH2P23942 346 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 HSD3B2P26439 372 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 OXTRP30559 389 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CCR5P51681 352 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 SLC7A2P52569 658 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 PTGR1Q14914 329 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CYP2A13Q16696 494 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 ZNF423Q2M1K9 1284 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CATSPEREQ5SY80 951 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 ATG9BQ674R7 924 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 NXPE4Q6UWF7 544 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 RD3Q7Z3Z2 195 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 FAM9CQ8IZT9 166 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 RNF175Q8N4F7 328 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 RNF148Q8N7C7 305 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 ENDOVQ8N8Q3 282 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 HIPK4Q8NE63 616 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CLHC1Q8NHS4 586 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 WDR20Q8TBZ3 569 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 SMPDL3AQ92484 453 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 JADE3Q92613 823 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 PDXPQ96GD0 296 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 TOE1Q96GM8 510 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 SCARF2Q96GP6 870 aaPredicted RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 APIPQ96GX9 242 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 APOLD1Q96LR9 279 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 GUCD1Q96NT3 240 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 MTERF1Q99551 399 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 C6orf106Q9H6K1 298 aaPredicted RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 NKX1-2Q9UD57 310 aaPredicted RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 BCAP29Q9UHQ4 241 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 TMED5Q9Y3A6 229 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 NUMA1Q14980 2115 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 PIPSLA2A3N6 862 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 MYO1DO94832 1006 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 RASGRP1O95267 797 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 IGLV3-19P01714 112 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CDH1P12830 882 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 XRCC1P18887 633 aaPredicted RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 ZFP36L2P47974 494 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 PHEXP78562 749 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 FOXM1Q08050 763 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 LAPTM5Q13571 262 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CCNIQ14094 377 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CAPRIN1Q14444 709 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 TCEA2Q15560 299 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 UAP1L1Q3KQV9 507 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 USP39Q53GS9 565 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 SAMD4BQ5PRF9 694 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 C17orf64Q86WR6 236 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 GLB1L3Q8NCI6 653 aaPredicted RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 UBE2E3Q969T4 207 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 WDR34Q96EX3 536 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 SHDQ96IW2 340 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 BMFQ96LC9 184 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 HOPXQ9BPY8 73 aaPredicted RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 SLC39A3Q9BRY0 314 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 ACAT2Q9BWD1 397 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 EBPLQ9BY08 206 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 PCBD2Q9H0N5 130 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 EHD1Q9H4M9 534 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 ACTL8Q9H568 366 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 LTB4R2Q9NPC1 389 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 SLC52A3Q9NQ40 469 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 PRDM8Q9NQV8 689 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 GEMIN8Q9NWZ8 242 aaKnown RBP11.76□□□□□ -0.53
LAMP3-202ENST00000466939 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 TAC3Q9UHF0 121 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 ANGPTL2Q9UKU9 493 aa11.76□□□□□ -0.53
LAMP3-202ENST00000466939 LAMA3Q16787 3333 aa11.75□□□□□ -0.53
LAMP3-202ENST00000466939 CDH23Q9H251 3354 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms