RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZNF678Q5SXM1 525 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 TMEM26Q6ZUK4 368 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 RBM12BQ8IXT5 1001 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 CPSF7Q8N684 471 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 AVL9Q8NBF6 648 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 JPH3Q8WXH2 748 aaPredicted RBP16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 MCUR1Q96AQ8 359 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 RHBDF1Q96CC6 855 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 GSTO2Q9H4Y5 243 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 NUDT4Q9NZJ9 180 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 U3KQA8 63 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 C4orf47A7E2U8 309 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 GDF9O60383 454 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 FOXD2O60548 495 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 ANXA5P08758 320 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 GRK6P43250 576 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 RAP1GDS1P52306 607 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 PFKFB4Q16877 469 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 SULT1C3Q6IMI6 304 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 RAB44Q7Z6P3 723 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 ZNF761Q86XN6 746 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 LMNTD1Q8N9Z9 388 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 PDPRQ8NCN5 879 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 ZNF480Q8WV37 535 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 FBXL8Q96CD0 374 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 MOCOSQ96EN8 888 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 IL17FQ96PD4 163 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 OR52B2Q96RD2 323 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 EGFL8Q99944 293 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 XKR8Q9H6D3 395 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 STOX2Q9P2F5 926 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 PTBP2Q9UKA9 531 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 PADI4Q9UM07 663 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 RNF215Q9Y6U7 377 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 ASXL3Q9C0F0 2248 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 GOLGA8QA0A0J9YX86 632 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 GOLGA8OA6NCC3 632 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 PABPN1LA6NDY0 278 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 GOLGA8NF8WBI6 632 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 TAPBPO15533 448 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 NUDT21O43809 227 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 GFAPP14136 432 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 NCF2P19878 526 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 IMPA1P29218 277 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 INHBCP55103 352 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 BIRC2Q13490 618 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 NAA25Q14CX7 972 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 C18orf21Q32NC0 220 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 PROX2Q3B8N5 592 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 LSM12Q3MHD2 195 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 FBXO48Q5FWF7 155 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 RBM15BQ8NDT2 890 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 OR4E2Q8NGC2 313 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 LCN9Q8WX39 176 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 PHF21BQ96EK2 531 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 NUF2Q9BZD4 464 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 LRIT1Q9P2V4 623 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 ICKQ9UPZ9 632 aa16.37■□□□□ 0.21
EXOSC3-203ENST00000465229 A8MUI8 341 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 FLRT2O43155 660 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 ERGP11308 486 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 GLB1P16278 677 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 HNMTP50135 292 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 RAB28P51157 221 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 KLF10Q13118 480 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 NR0B2Q15466 257 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 CYP2A13Q16696 494 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 UNC50Q53HI1 259 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 AGTRAPQ6RW13 159 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 CUZD1Q86UP6 607 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 FBXO39Q8N4B4 442 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 PTGR2Q8N8N7 351 aaPredicted RBP16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 LINC01555Q8NAE3 123 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 AGR3Q8TD06 166 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 ACTRT2Q8TDY3 377 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 RHBDD1Q8TEB9 315 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 ESAMQ96AP7 390 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 SH3KBP1Q96B97 665 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 C1QTNF3Q9BXJ4 246 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 ATG10Q9H0Y0 220 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 ZNF385DQ9H6B1 395 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 UCK1Q9HA47 277 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 SPATA7Q9P0W8 599 aa16.36■□□□□ 0.21
EXOSC3-203ENST00000465229 RHPN2P1A8MT19 583 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 E7ENX8 843 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 E9PBE3 544 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 STX16-NPEPL1H3BU86 382 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 STX16O14662 325 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 KDM1AO60341 852 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 KLHL41O60662 606 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 S100BP04271 92 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 FGF4P08620 206 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 PKLRP30613 574 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 GGT5P36269 586 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 CPOXP36551 454 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 PGM1P36871 562 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 HSD17B2P37059 387 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 AGTR2P50052 363 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 PNLIPRP1P54315 467 aa16.35■□□□□ 0.21
EXOSC3-203ENST00000465229 TAP2Q03519 686 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms