RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 GABPB2Q8TAK5 448 aaPredicted RBP12.43□□□□□ -0.42
XRN1-203ENST00000463916 LINGO1Q96FE5 620 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 ZNF285Q96NJ3 590 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 ABCF3Q9NUQ8 709 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 BAHCC1Q9P281 2608 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 TAC3Q9UHF0 121 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 PDE10AQ9Y233 779 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 SPTA1P02549 2419 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 CCDC88CQ9P219 2028 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 PCSK5Q92824 1860 aa12.43□□□□□ -0.42
XRN1-203ENST00000463916 A0A0J9YVX5 310 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 OR2A25A4D2G3 310 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 CNOT3O75175 753 aaKnown RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 FKBP9O95302 570 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 MED26O95402 600 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 FDXRP22570 491 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 CALCOCO2Q13137 446 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 NCF4Q15080 339 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 PHKG1Q16816 387 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ZXDCQ2QGD7 858 aaPredicted RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 TMEM207Q6UWW9 146 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 STRA8Q7Z7C7 330 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ADAMTS17Q8TE56 1095 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 DPH2Q9BQC3 489 aaPredicted RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 SELENOSQ9BQE4 189 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 NDC1Q9BTX1 674 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ZFATQ9P243 1243 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 STOX2Q9P2F5 926 aaPredicted RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 CDC23Q9UJX2 597 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 IKZF3Q9UKT9 509 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 POLHQ9Y253 713 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 CXorf49A8MYA2 514 aaPredicted RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 B8ZZF3 427 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 K7EM74 188 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 DNAJB5O75953 348 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 AGXTP21549 392 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ALAS2P22557 587 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 CMPK1P30085 196 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 RPA3P35244 121 aaPredicted RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 PLTPP55058 493 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 VSX2P58304 361 aaPredicted RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 DCDP81605 110 aaKnown RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 SLC7A5Q01650 507 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 PRDX1Q06830 199 aaKnown RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 ZC3H12BQ5HYM0 836 aaKnown RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 WASHC2DQ5SRD0 308 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 MLIPQ5VWP3 458 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ICE2Q659A1 982 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ZDHHC24Q6UX98 284 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 TTLL10Q6ZVT0 673 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ZC3HC1Q86WB0 502 aaKnown RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 FBXO25Q8TCJ0 367 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 PYROXD1Q8WU10 500 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 ABHD17AQ96GS6 310 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 MCMBPQ9BTE3 642 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 TRIM55Q9BYV6 548 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 SLC25A18Q9H1K4 315 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 MRPS30Q9NP92 439 aaKnown RBP12.42□□□□□ -0.42
XRN1-203ENST00000463916 ENAMQ9NRM1 1142 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 SNX7Q9UNH6 387 aa12.42□□□□□ -0.42
XRN1-203ENST00000463916 HEATR5BQ9P2D3 2071 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 HSD17B2P37059 387 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 RGS4P49798 205 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 IL2P60568 153 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 ZNF460Q14592 562 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 NKAIN1Q4KMZ8 207 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 CPZQ66K79 652 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 ZNF425Q6IV72 752 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 RNF44Q7L0R7 432 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 PAQR7Q86WK9 346 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 PROKR1Q8TCW9 393 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 PLCD4Q9BRC7 762 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 ADNPQ9H2P0 1102 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 PARVBQ9HBI1 364 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 ZNF71Q9NQZ8 489 aaPredicted RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 TXLNGQ9NUQ3 528 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 CUEDC1Q9NWM3 386 aaPredicted RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 SRPK3Q9UPE1 567 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 UTP11Q9Y3A2 253 aaKnown RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 ANKRD12Q6UB98 2062 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 ESYT3A0FGR9 886 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 FITM1A5D6W6 292 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 SRPX2O60687 465 aaPredicted RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 URI1O94763 535 aaPredicted RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 C1QAP02745 245 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 SAT1P21673 171 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 GPX6P59796 221 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 CHAF1BQ13112 559 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 FAM45BPQ6NSW5 357 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 ZNF605Q86T29 641 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 MYO1HQ8N1T3 1032 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 METTL27Q8N6F8 245 aaPredicted RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 FAM45AQ8TCE6 357 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 MCOLN3Q8TDD5 553 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 LRRC1Q9BTT6 524 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 CUTCQ9NTM9 273 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 IFT80Q9P2H3 777 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms