RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CCNDBP1O95273 360 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 CPSF4O95639 269 aaKnown RBP16.44■□□□□ 0.22
ACTB-207ENST00000462494 FTH1P02794 183 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 ENGP17813 658 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 EFNA1P20827 205 aaPredicted RBP16.44■□□□□ 0.22
ACTB-207ENST00000462494 IGFBP5P24593 272 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 IRF8Q02556 426 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 LAIR2Q6ISS4 152 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 RAB2BQ8WUD1 216 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 CSF3RQ99062 836 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 MTERF1Q99551 399 aaKnown RBP16.44■□□□□ 0.22
ACTB-207ENST00000462494 RIBC2Q9H4K1 309 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 AASDHPPTQ9NRN7 309 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 BAG5Q9UL15 447 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 CCL26Q9Y258 94 aa16.44■□□□□ 0.22
ACTB-207ENST00000462494 NEDD8-MDP1E9PL57 170 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 hCG_2039718K7EN88 272 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 CLIC1O00299 241 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 GRM6O15303 877 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 MPC1LP0DKB6 136 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 COX7A2P14406 83 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 PRPH2P23942 346 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 PFN3P60673 137 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 ABRQ12979 859 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 SIM2Q14190 667 aaPredicted RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 GBX1Q14549 363 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 DUOXA1Q1HG43 343 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 XKR6Q5GH73 641 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 CPZQ66K79 652 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 ASTLQ6HA08 431 aaPredicted RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 TMEM25Q86YD3 366 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 TMC8Q8IU68 726 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 CSGALNACT1Q8TDX6 532 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 SNRNP27Q8WVK2 155 aaKnown RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 BORCS5Q969J3 196 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 CORO1BQ9BR76 489 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 SLC46A2Q9BY10 475 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 GMEB1Q9Y692 573 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 GFYI3L273 518 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 XPNPEP2O43895 674 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 JUPP14923 745 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 PRPS1L1P21108 318 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 C21orf59P57076 290 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 GABARAPL2P60520 117 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 DEFB103AP81534 67 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 TOP3AQ13472 1001 aaPredicted RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 RAPSNQ13702 412 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 ZNF829Q3KNS6 432 aaPredicted RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 PLEKHS1Q5SXH7 462 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 ZDHHC20Q5W0Z9 365 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 GTF2IRD2BQ6EKJ0 949 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 CNKSR3Q6P9H4 555 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 SHQ1Q6PI26 577 aaKnown RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 GTF2IRD2Q86UP8 949 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 MED8Q96G25 268 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 LMLNQ96KR4 655 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 NODALQ96S42 347 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 CPEB1Q9BZB8 566 aaKnown RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 PCDH12Q9NPG4 1184 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 PAK1IP1Q9NWT1 392 aaPredicted RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 PCDH10Q9P2E7 1040 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 AASSQ9UDR5 926 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 FBXO10Q9UK96 956 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 PSME2Q9UL46 239 aa16.43■□□□□ 0.22
ACTB-207ENST00000462494 TDRKHQ9Y2W6 561 aaKnown RBP16.43■□□□□ 0.22
ACTB-207ENST00000462494 MAN1A2O60476 641 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 XYLBO75191 536 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 EPN2O95208 641 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 IL1RNP18510 177 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 ARHGDIAP52565 204 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 TLE2Q04725 743 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 SP140Q13342 867 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 UGT8Q16880 541 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 DPY19L1Q2PZI1 675 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 C16orf87Q6PH81 154 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 GDPD4Q6W3E5 623 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
ACTB-207ENST00000462494 CEP68Q76N32 757 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 VTCN1Q7Z7D3 282 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 CYP4Z1Q86W10 505 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 CHPFQ8IZ52 775 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 CLECL1Q8IZS7 167 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 ZNF641Q96N77 438 aaPredicted RBP16.42■□□□□ 0.22
ACTB-207ENST00000462494 DPH2Q9BQC3 489 aaPredicted RBP16.42■□□□□ 0.22
ACTB-207ENST00000462494 FUNDC2Q9BWH2 189 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 EMILIN2Q9BXX0 1053 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 PDE4DIPQ5VU43 2346 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 A0A1W2PQ67 120 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 TMEM202A6NGA9 273 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 INMTO95050 263 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 FKBP9O95302 570 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 GNRH1P01148 92 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 CD22P20273 847 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 AP1S2P56377 157 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 CDK5R2Q13319 367 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 RFX4Q33E94 735 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 TBC1D25Q3MII6 688 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 OR2T5Q6IEZ7 315 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 CRTC3Q6UUV7 619 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 HSD11B1LQ7Z5J1 315 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms