RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SERPINB5P36952 375 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 SLC9A3P48764 834 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 HERVK_113P63132 956 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 NFKB2Q00653 900 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 PRKAA1Q13131 559 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 LSM12Q3MHD2 195 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 LDLRAP1Q5SW96 308 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 RAET1GQ6H3X3 334 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 KIAA1211LQ6NV74 962 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 PGM2L1Q6PCE3 622 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 PHYKPLQ8IUZ5 450 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 FBXO39Q8N4B4 442 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 HDDC3Q8N4P3 179 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 OR2T3Q8NH03 318 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 GANCQ8TET4 914 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 CHPT1Q8WUD6 406 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 DACT3Q96B18 629 aaPredicted RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 TOE1Q96GM8 510 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 PDLIM5Q96HC4 596 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 HS6ST2Q96MM7 605 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 CMTM3Q96MX0 182 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 RILPQ96NA2 401 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 ERVK-6Q9BXR3 956 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 MKRN2Q9H000 416 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 NCOR1P1Q9H4R4 102 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 DCLRE1BQ9H816 532 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 S100A14Q9HCY8 104 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 LATS2Q9NRM7 1088 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 TBC1D23Q9NUY8 699 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 HEY2Q9UBP5 337 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 LRRK1Q38SD2 2015 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 MYO10Q9HD67 2058 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 TEX51A0A1B0GUA7 166 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 A0A1W2PP55 124 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 KLF8O95600 359 aaPredicted RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 MPSTP25325 297 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 GPR1P46091 355 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 RPL14P50914 215 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 BOP1Q14137 746 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 TMEM52BQ4KMG9 183 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 KHDC1Q4VXA5 237 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 ACSBG2Q5FVE4 666 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 ZNF678Q5SXM1 525 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 ZNF648Q5T619 568 aaPredicted RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 AGBL4Q5VU57 503 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 FAM205BPQ63HN1 556 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 RPS27LQ71UM5 84 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 TRMT11Q7Z4G4 463 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 MTDHQ86UE4 582 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 GPSM1Q86YR5 675 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 PM20D2Q8IYS1 436 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 HLA-CQ95604 372 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 L3HYPDHQ96EM0 354 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 GABRG3Q99928 467 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 EML4Q9HC35 981 aaKnown RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 CRLF2Q9HC73 371 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 CD274Q9NZQ7 290 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 MBD1Q9UIS9 605 aaPredicted RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 ZFP69BQ9UJL9 534 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 STK38LQ9Y2H1 464 aa10.11□□□□□ -0.79
HERC4-207ENST00000460168 RPH3AQ9Y2J0 694 aaPredicted RBP10.11□□□□□ -0.79
HERC4-207ENST00000460168 ATP6V1G2-DDX39BF2Z307 99 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 K7ESM1 405 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 QSOX1O00391 747 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 SHOXO15266 292 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 NARSO43776 548 aaKnown RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 UBOX5O94941 541 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 SIX3O95343 332 aaPredicted RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 ZBTB11O95625 1053 aaPredicted RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 DNTTP04053 509 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 HEXBP07686 556 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 TMEM115Q12893 351 aaPredicted RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 FRMD7Q6ZUT3 714 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 ZNF765Q7L2R6 523 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 DCP2Q8IU60 420 aaKnown RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 GALNT13Q8IUC8 556 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 ZNF680Q8NEM1 530 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 LHFPL5Q8TAF8 219 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 SKA2Q8WVK7 121 aaPredicted RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 ATP6V1E2Q96A05 226 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 EBF4Q9BQW3 602 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 MYLK2Q9H1R3 596 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 SERGEFQ9UGK8 458 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 ENOPH1Q9UHY7 261 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 ZDHHC2Q9UIJ5 367 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 CLEC4AQ9UMR7 237 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 PCDHGA2Q9Y5H1 932 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 ANKRD12Q6UB98 2062 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 COL4A2P08572 1712 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 TSPAN6O43657 245 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 GMNNO75496 209 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 TM7SF2O76062 418 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 AP2A2O94973 939 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 FTH1P02794 183 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 UBTFL6P0CB48 400 aaPredicted RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 FOSL2P15408 326 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 CCR7P32248 378 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 SOX11P35716 441 aa10.1□□□□□ -0.79
HERC4-207ENST00000460168 RPS14P62263 151 aaKnown RBP10.1□□□□□ -0.79
HERC4-207ENST00000460168 CREB5Q02930 508 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms