RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 KCTD19Q17RG1 926 aaPredicted RBP21.77■■□□□ 1.08
PTPN4-207ENST00000460162 TTLL9Q3SXZ7 439 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 FRMPD2BQ6IN97 320 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 PRMT9Q6P2P2 845 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 TTC27Q6P3X3 843 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 NEK10Q6ZWH5 1172 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.77■■□□□ 1.08
PTPN4-207ENST00000460162 SMPDL3AQ92484 453 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 ZNF669Q96BR6 464 aaPredicted RBP21.77■■□□□ 1.08
PTPN4-207ENST00000460162 VPS50Q96JG6 964 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 SEMA3GQ9NS98 782 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 MAP10Q9P2G4 905 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 DOCK10Q96BY6 2186 aa21.77■■□□□ 1.07
PTPN4-207ENST00000460162 MAGEB16A2A368 324 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 VSTM2BA6NLU5 285 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 ZNF839A8K0R7 811 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 TCP11X1B4DZS4 312 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 NRP2O60462 931 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 USP1O94782 785 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 ERVK-10P10266 1014 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 ITGA3P26006 1051 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 HSD17B2P37059 387 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 KLHL38Q2WGJ6 581 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 ACSBG2Q5FVE4 666 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 PRAMEF13Q5VWM6 474 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 ZADH2Q8N4Q0 377 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 METTL27Q8N6F8 245 aaPredicted RBP21.76■■□□□ 1.07
PTPN4-207ENST00000460162 MCUQ8NE86 351 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 SERPINB12Q96P63 405 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 TRIM56Q9BRZ2 755 aaKnown RBP21.76■■□□□ 1.07
PTPN4-207ENST00000460162 DPH7Q9BTV6 452 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 ILKAPQ9H0C8 392 aaPredicted RBP21.76■■□□□ 1.07
PTPN4-207ENST00000460162 SOX17Q9H6I2 414 aaPredicted RBP21.76■■□□□ 1.07
PTPN4-207ENST00000460162 LRRC4CQ9HCJ2 640 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 CUEDC1Q9NWM3 386 aaPredicted RBP21.76■■□□□ 1.07
PTPN4-207ENST00000460162 HEATR5BQ9P2D3 2071 aa21.76■■□□□ 1.07
PTPN4-207ENST00000460162 HIVEP3Q5T1R4 2406 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 UTP20O75691 2785 aaKnown RBP21.75■■□□□ 1.07
PTPN4-207ENST00000460162 SDR42E2A6NKP2 422 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 MASP2O00187 686 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 VPS26AO75436 327 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 RPA3P35244 121 aaPredicted RBP21.75■■□□□ 1.07
PTPN4-207ENST00000460162 OR1D4P47884 311 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 CLCN7P51798 805 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 EMP3P54852 163 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 RBBP7Q16576 425 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 CYP1B1Q16678 543 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 MUM1Q2TAK8 710 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 TUBB8Q3ZCM7 444 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 PLEKHN1Q494U1 663 aaPredicted RBP21.75■■□□□ 1.07
PTPN4-207ENST00000460162 KIRREL2Q6UWL6 708 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 LMNTD2Q8IXW0 634 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 KCNJ9Q92806 393 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 MAGOHBQ96A72 148 aaKnown RBP21.75■■□□□ 1.07
PTPN4-207ENST00000460162 PBKQ96KB5 322 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 NAP1L3Q99457 506 aaPredicted RBP21.75■■□□□ 1.07
PTPN4-207ENST00000460162 ACAT2Q9BWD1 397 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 ZNF304Q9HCX3 659 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 MRPS30Q9NP92 439 aaKnown RBP21.75■■□□□ 1.07
PTPN4-207ENST00000460162 KLHL42Q9P2K6 505 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 GALPQ9UBC7 116 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 ZC3H7BQ9UGR2 993 aaKnown RBP21.75■■□□□ 1.07
PTPN4-207ENST00000460162 JRKLQ9Y4A0 524 aa21.75■■□□□ 1.07
PTPN4-207ENST00000460162 LOC105369274A0A096LPK9 316 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 LOC102723532A0A0G2JNH3 316 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 CTAGE9A4FU28 777 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 CCNDBP1O95273 360 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 MAGEA3P43357 314 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 CARSP49589 748 aaKnown RBP21.74■■□□□ 1.07
PTPN4-207ENST00000460162 THOC5Q13769 683 aaKnown RBP21.74■■□□□ 1.07
PTPN4-207ENST00000460162 IRAK1BP1Q5VVH5 260 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 Q6ZS92 163 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 OR4N4Q8N0Y3 316 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 FBXO15Q8NCQ5 510 aaPredicted RBP21.74■■□□□ 1.07
PTPN4-207ENST00000460162 SSC4DQ8WTU2 575 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 SNRNP40Q96DI7 357 aaKnown RBP21.74■■□□□ 1.07
PTPN4-207ENST00000460162 C10orf90Q96M02 699 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 PLCD4Q9BRC7 762 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 CRB3Q9BUF7 120 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 CCDC68Q9H2F9 335 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 UTP6Q9NYH9 597 aaKnown RBP21.74■■□□□ 1.07
PTPN4-207ENST00000460162 ZNF282Q9UDV7 671 aaPredicted RBP21.74■■□□□ 1.07
PTPN4-207ENST00000460162 MAU2Q9Y6X3 613 aa21.74■■□□□ 1.07
PTPN4-207ENST00000460162 ICE1Q9Y2F5 2266 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 MDC1Q14676 2089 aaKnown RBP21.73■■□□□ 1.07
PTPN4-207ENST00000460162 ZCWPW2A0A1B0GU75 182 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 MED26O95402 600 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 EIF2S1P05198 315 aaKnown RBP21.73■■□□□ 1.07
PTPN4-207ENST00000460162 ENO3P13929 434 aaPredicted RBP21.73■■□□□ 1.07
PTPN4-207ENST00000460162 COILP38432 576 aaPredicted RBP21.73■■□□□ 1.07
PTPN4-207ENST00000460162 PNLIPRP1P54315 467 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 YBX1P67809 324 aaKnown RBP21.73■■□□□ 1.07
PTPN4-207ENST00000460162 OCA2Q04671 838 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 MRPL49Q13405 166 aaKnown RBP21.73■■□□□ 1.07
PTPN4-207ENST00000460162 PRTGQ2VWP7 1150 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 CCDC137Q6PK04 289 aaKnown RBP21.73■■□□□ 1.07
PTPN4-207ENST00000460162 SUSD1Q6UWL2 747 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 SHISA6Q6ZSJ9 500 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 REXO1L1PQ8IX06 675 aa21.73■■□□□ 1.07
PTPN4-207ENST00000460162 DTWD1Q8N5C7 304 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms