RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 CRTC1Q6UUV9 634 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 TMCO2Q7Z6W1 182 aaPredicted RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 RNF180Q86T96 592 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 VOPP1Q96AW1 172 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 REXO4Q9GZR2 422 aaKnown RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 AKIP1Q9NQ31 210 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 GMPPBQ9Y5P6 360 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 KCNE1BA0A087WTH5 132 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 GREM1O60565 184 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ERN1O75460 977 aaKnown RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 CST5P28325 142 aaPredicted RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 CD70P32970 193 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 BOP1Q14137 746 aaKnown RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 MAPK11Q15759 364 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 CATSPEREQ5SY80 951 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 OR2T5Q6IEZ7 315 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 MACC1Q6ZN28 852 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 DSG4Q86SJ6 1040 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 HIPK1Q86Z02 1210 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF540Q8NDQ6 660 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 OR2T29Q8NH02 315 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 RORBQ92753 470 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 SCLYQ96I15 445 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 CDK5RAP1Q96SZ6 601 aaKnown RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 P2RY13Q9BPV8 354 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 BTBD2Q9BX70 525 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 SLC32A1Q9H598 525 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF334Q9HCZ1 680 aaPredicted RBP13.74□□□□□ -0.21
SCFD1-203ENST00000458591 ORC6Q9Y5N6 252 aa13.74□□□□□ -0.21
SCFD1-203ENST00000458591 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 KCNK5O95279 499 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 FKBP9O95302 570 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 VIPP01282 170 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 KRT6AP02538 564 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 KRT6BP04259 564 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 TNFRSF1BP20333 461 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 SPAM1P38567 509 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 KRT6CP48668 564 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 TMED10P49755 219 aaKnown RBP13.73□□□□□ -0.21
SCFD1-203ENST00000458591 SLC35A2P78381 396 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 CLCA4Q14CN2 919 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 LRRC66Q68CR7 880 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 SLC8B1Q6J4K2 584 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 TTC29Q8NA56 475 aaPredicted RBP13.73□□□□□ -0.21
SCFD1-203ENST00000458591 MINDY2Q8NBR6 621 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 FBLIM1Q8WUP2 373 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 S100ZQ8WXG8 99 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 MAL2Q969L2 176 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 YIPF6Q96EC8 236 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 REXO5Q96IC2 774 aaKnown RBP13.73□□□□□ -0.21
SCFD1-203ENST00000458591 TPD52L3Q96J77 140 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 HERC2P3Q9BVR0 1158 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 MAGIXQ9H6Y5 334 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 TMPRSS11EQ9UL52 423 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 MAN2B2Q9Y2E5 1009 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
SCFD1-203ENST00000458591 M0R3G1 203 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 CLIC1O00299 241 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 FPGTO14772 594 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 COL6A1P12109 1028 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 LHCGRP22888 699 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 TUFMP49411 452 aaKnown RBP13.73□□□□□ -0.21
SCFD1-203ENST00000458591 CREMQ03060 361 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 ABHD18Q0P651 414 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 INAQ16352 499 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 UGT8Q16880 541 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 SYT16Q17RD7 645 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 PTOV1Q86YD1 416 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 ZZZ3Q8IYH5 903 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 UBTD2Q8WUN7 234 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 HSH2DQ96JZ2 352 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 PANX1Q96RD7 426 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 MTERF1Q99551 399 aaKnown RBP13.73□□□□□ -0.21
SCFD1-203ENST00000458591 EPS8L2Q9H6S3 715 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 TMEM184CQ9NVA4 438 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 GIN1Q9NXP7 522 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 YIPF1Q9Y548 306 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 PIKFYVEQ9Y2I7 2098 aa13.73□□□□□ -0.21
SCFD1-203ENST00000458591 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 WNT9AO14904 365 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 RECQL5O94762 991 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 GABARAPO95166 117 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 UGT2B4P06133 528 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CCDC159P0C7I6 412 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 ITGAMP11215 1152 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 AMD1P17707 334 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CD22P20273 847 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 ACVR2AP27037 513 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 AOAHP28039 575 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 KRT20P35900 424 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 MAGEA2P43356 314 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 EIF2B2P49770 351 aaKnown RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 WNT3P56703 355 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms