RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ZFATQ9P243 1243 aa15.45■□□□□ 0.06
SCAMP4-205ENST00000452128 STOX2Q9P2F5 926 aaPredicted RBP15.45■□□□□ 0.06
SCAMP4-205ENST00000452128 FER1L5A0AVI2 2057 aa15.45■□□□□ 0.06
SCAMP4-205ENST00000452128 LOC105369274A0A096LPK9 316 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 LOC102723532A0A0G2JNH3 316 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 ZSCAN9O15535 394 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 SRPX2O60687 465 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 CNOT3O75175 753 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 KLF7O75840 302 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 MED26O95402 600 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 PRB1P04280 392 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 HBQ1P09105 142 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 MAGEA4P43358 317 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 RGS4P49798 205 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 IL2P60568 153 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 NFKB2Q00653 900 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 MC1RQ01726 317 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 SP140Q13342 867 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 LY6DQ14210 128 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 PRTGQ2VWP7 1150 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 PTCHD3Q3KNS1 767 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 FRMPD2BQ6IN97 320 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 SBSNQ6UWP8 590 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 RELL1Q8IUW5 271 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 OR4N4Q8N0Y3 316 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 RAB42Q8N4Z0 105 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 ZNF655Q8N720 491 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 GPATCH11Q8N954 259 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 PPFIBP2Q8ND30 876 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 ANKRD49Q8WVL7 239 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 MR1Q95460 341 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 LINGO1Q96FE5 620 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 CCDC138Q96M89 665 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 DPH2Q9BQC3 489 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 DPH7Q9BTV6 452 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 SGPP1Q9BX95 441 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 ACTL8Q9H568 366 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 WDR70Q9NW82 654 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 MTO1Q9Y2Z2 717 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 ZNF462Q96JM2 2506 aa15.44■□□□□ 0.06
SCAMP4-205ENST00000452128 KLK3P07288 261 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 ZNF37AP17032 561 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 ECHS1P30084 290 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 RPS18P62269 152 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 PPP1R3AQ16821 1122 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 ZC3H12BQ5HYM0 836 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 ICE2Q659A1 982 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 MBOAT1Q6ZNC8 495 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 TMEM151BQ8IW70 566 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 GPR135Q8IZ08 494 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 ZNF843Q8N446 348 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 PROKR1Q8TCW9 393 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 MCOLN3Q8TDD5 553 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 MED8Q96G25 268 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 VPS39Q96JC1 886 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 OR2A5Q96R48 311 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 ACAT2Q9BWD1 397 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 GEMIN8Q9NWZ8 242 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 NSMCE4AQ9NXX6 385 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 ANKMY1Q9P2S6 941 aa15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 DHCR7Q9UBM7 475 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-205ENST00000452128 FAM95CA0A1B0GW59 222 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 ZNF839A8K0R7 811 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 KIF2AO00139 706 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 KATNA1O75449 491 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 PRKAR1AP10644 381 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 NPPBP16860 134 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 CMPK1P30085 196 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 CSRP3P50461 194 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 ABATP80404 500 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 ILF2Q12905 390 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 IL10RAQ13651 578 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 UGT8Q16880 541 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 TAF1BQ53T94 588 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 UBAP2Q5T6F2 1119 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 FAM69BQ5VUD6 431 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 MRPL14Q6P1L8 145 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 BORAQ6PGQ7 559 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 CAPN12Q6ZSI9 719 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 SYVN1Q86TM6 617 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 OR56A3Q8NH54 315 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 CLIP3Q96DZ5 547 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 GPR22Q99680 433 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 POPDC3Q9HBV1 291 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 TAC3Q9UHF0 121 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 TCFL5Q9UL49 500 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 NOVA2Q9UNW9 492 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 SRPK3Q9UPE1 567 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 SH2B3Q9UQQ2 575 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 KCNMB2Q9Y691 235 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 PCM1Q15154 2024 aa15.42■□□□□ 0.06
SCAMP4-205ENST00000452128 HEATR5BQ9P2D3 2071 aa15.41■□□□□ 0.06
SCAMP4-205ENST00000452128 FAM87AP0C7U9 286 aa15.41■□□□□ 0.06
SCAMP4-205ENST00000452128 RPA3P35244 121 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-205ENST00000452128 EMP3P54852 163 aa15.41■□□□□ 0.06
SCAMP4-205ENST00000452128 SNRPNP63162 240 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-205ENST00000452128 POU4F1Q01851 419 aa15.41■□□□□ 0.06
SCAMP4-205ENST00000452128 PDAP1Q13442 181 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms