RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GNAZP19086 355 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF41P51814 821 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CLCA4Q14CN2 919 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PGS1Q32NB8 556 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 BMP8AQ7Z5Y6 402 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 IQCHQ86VS3 1027 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMEM105Q8N8V8 129 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 MRPS26Q9BYN8 205 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 NANOGQ9H9S0 305 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 NPHS2Q9NP85 383 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ATAD3AQ9NVI7 634 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 R3HDM2Q9Y2K5 976 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 USP3Q9Y6I4 520 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ECM29Q5VYK3 1845 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRSS38A1L453 326 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PFDN1O60925 122 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 LINGO3P0C6S8 592 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CCR8P51685 355 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ADPRHP54922 357 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 PMS2CLQ68D20 193 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 LRRC15Q8TF66 581 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 S100A13Q99584 98 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR8D2Q9GZM6 311 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF304Q9HCX3 659 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 CHST11Q9NPF2 352 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 POT1Q9NUX5 634 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 KLHL14Q9P2G3 628 aa5.48□□□□□ -1.53
CDC42BPA-209ENST00000448940 LRRC10BA6NIK2 292 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF726A6NNF4 738 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 HLA-DQB2P05538 268 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 HGFP14210 728 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TNFSF4P23510 183 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CNTFP26441 200 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 HPCAL1P37235 193 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CTC1Q2NKJ3 1217 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 ESCO2Q56NI9 601 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DIO2Q92813 273 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 MTBPQ96DY7 904 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC12A9Q9BXP2 914 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 HDAC8Q9BY41 377 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 INTS9Q9NV88 658 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PSMC3IPQ9P2W1 217 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CPNE7Q9UBL6 633 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 HS3ST2Q9Y278 367 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PCNX2A6NKB5 2137 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 SH3PXD2BA1X283 911 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 EIF3HO15372 352 aaKnown RBP eCLIP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 GDF1P27539 372 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAZP56270 477 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 ESRRGP62508 458 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DCDP81605 110 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PPIDQ08752 370 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 KCTD8Q6ZWB6 473 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TUBB6Q9BUF5 446 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TLR10Q9BXR5 811 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 MKRN2Q9H000 416 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 MYLK2Q9H1R3 596 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 RMND5AQ9H871 391 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 NEK6Q9HC98 313 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAGEE1Q9HCI5 957 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DDX18Q9NVP1 670 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DKK3Q9UBP4 350 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PMF1-BGLAPU3KQ54 211 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TNFRSF10CO14798 259 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 STK16O75716 305 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 KRT16P08779 473 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CPA3P15088 417 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 LEPRP48357 1165 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PMS2P54278 862 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CDH13P55290 713 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC7A5Q01650 507 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAD2L1Q13257 205 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMED1Q13445 227 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DPYSQ14117 519 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 NOMO1Q15155 1222 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPAT3Q53EU6 434 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRAMEF13Q5VWM6 474 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 ASCL5Q7RTU5 278 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMC3Q7Z5M5 1100 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRPV3Q8NET8 790 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 LRRN4Q8WUT4 740 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC13A3Q8WWT9 602 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 QKIQ96PU8 341 aaKnown RBP eCLIP5.47□□□□□ -1.537e-32■■■■■ 79
CDC42BPA-209ENST00000448940 TRIM51Q9BSJ1 452 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 HAPLN2Q9GZV7 340 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 FAIMQ9NVQ4 179 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 FARSAQ9Y285 508 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 RBM7Q9Y580 266 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRRT4C9JH25 899 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 RNF225M0QZC1 329 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 ANGPT2O15123 496 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 GDF9O60383 454 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 DCTN3O75935 186 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZBTB11O95625 1053 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 PENKP01210 267 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CBSLP0DN79 551 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 AK4P27144 223 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CBSP35520 551 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 IL10RAQ13651 578 aa5.47□□□□□ -1.53
CDC42BPA-209ENST00000448940 CYP27C1Q4G0S4 372 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms