RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ACTL9Q8TC94 416 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 IMMP1LQ96LU5 166 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 FERMT1Q9BQL6 677 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 TGIF2Q9GZN2 237 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 GOLPH3Q9H4A6 298 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 RIC8BQ9NVN3 520 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 ZC3H7BQ9UGR2 993 aaKnown RBP13.69□□□□□ -0.22
HMGN1-208ENST00000443046 CIDEBQ9UHD4 219 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 EFR3BQ9Y2G0 817 aa13.69□□□□□ -0.22
HMGN1-208ENST00000443046 OR51F1A6NGY5 319 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 SLCO2B1O94956 709 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 RPN2P04844 631 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 MYBL2P10244 700 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 ESRRAP11474 423 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-208ENST00000443046 FBLP22087 321 aaKnown RBP13.68□□□□□ -0.22
HMGN1-208ENST00000443046 CXCR2P25025 360 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 MSNP26038 577 aaKnown RBP13.68□□□□□ -0.22
HMGN1-208ENST00000443046 SLC26A3P40879 764 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 EFNA3P52797 238 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 PMP22Q01453 160 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 TLE4Q04727 773 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 EEF1A2Q05639 463 aaKnown RBP13.68□□□□□ -0.22
HMGN1-208ENST00000443046 DSG2Q14126 1118 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 MUM1Q2TAK8 710 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 FBXO42Q6P3S6 717 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 SPPL2CQ8IUH8 684 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 CDKL3Q8IVW4 592 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-208ENST00000443046 CEP97Q8IW35 865 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 SUN3Q8TAQ9 357 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 KRT35Q92764 455 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 GPR137Q96N19 417 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 NHEJ1Q9H9Q4 299 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-208ENST00000443046 STMN3Q9NZ72 180 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 IFNKQ9P0W0 207 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 STOX2Q9P2F5 926 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-208ENST00000443046 IMPACTQ9P2X3 320 aa13.68□□□□□ -0.22
HMGN1-208ENST00000443046 HEATR5BQ9P2D3 2071 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 A0A1W2PPV9 198 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 CCDC162PA2VCL2 907 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 STK10O94804 968 aaKnown RBP13.67□□□□□ -0.22
HMGN1-208ENST00000443046 RBP3P10745 1247 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 ICAM2P13598 275 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 CSE1LP55060 971 aaKnown RBP13.67□□□□□ -0.22
HMGN1-208ENST00000443046 COPS2P61201 443 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 AP2B1P63010 937 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 HSPA14Q0VDF9 509 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 POU6F1Q14863 301 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 KRTCAP3Q53RY4 240 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 ARHGEF39Q8N4T4 335 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 AMER3Q8N944 861 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 OR2L3Q8NG85 312 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 OR13J1Q8NGT2 312 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 OR2A1Q8NGT9 310 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 LKAAEAR1Q8TD35 194 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 ASZ1Q8WWH4 475 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 MVB12AQ96EY5 273 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 CCDC42Q96M95 316 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 ANP32EQ9BTT0 268 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 CARD6Q9BX69 1037 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 RAB11FIP5Q9BXF6 653 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 SYNPO2LQ9H987 977 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 C14orf105Q9NVL8 296 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 FAM169AQ9Y6X4 670 aa13.67□□□□□ -0.22
HMGN1-208ENST00000443046 ACANP16112 2415 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 A0A0J9YVX5 310 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 OR2A25A4D2G3 310 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 ASPDHA6ND91 283 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 GOLGA6L22H0YM25 854 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 CD1EP15812 388 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 AOAHP28039 575 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 PSMB5P28074 263 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 PTPN7P35236 360 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 EIF3EP60228 445 aaKnown RBP13.66□□□□□ -0.22
HMGN1-208ENST00000443046 TPM4P67936 248 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 CSNK1G2P78368 415 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 PARP6Q2NL67 630 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 ZNF766Q5HY98 468 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 ABHD17BQ5VST6 288 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 FAAH2Q6GMR7 532 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 H3F3CQ6NXT2 135 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 CHERPQ8IWX8 916 aaKnown RBP13.66□□□□□ -0.22
HMGN1-208ENST00000443046 MDS2Q8NDY4 140 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 PHF10Q8WUB8 498 aaKnown RBP13.66□□□□□ -0.22
HMGN1-208ENST00000443046 CHTF18Q8WVB6 975 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 LRRC45Q96CN5 670 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 MIPEPQ99797 713 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 TUBB6Q9BUF5 446 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 GPAMQ9HCL2 828 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 MKKSQ9NPJ1 570 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-208ENST00000443046 TRPC4Q9UBN4 977 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 SLC39A10Q9ULF5 831 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 CDC14AQ9UNH5 594 aa13.66□□□□□ -0.22
HMGN1-208ENST00000443046 H0YGG7 62 aa13.65□□□□□ -0.22
HMGN1-208ENST00000443046 ADAM10O14672 748 aa13.65□□□□□ -0.22
HMGN1-208ENST00000443046 FFAR3O14843 346 aa13.65□□□□□ -0.22
HMGN1-208ENST00000443046 GPR42O15529 346 aa13.65□□□□□ -0.22
HMGN1-208ENST00000443046 PJA2O43164 708 aa13.65□□□□□ -0.22
HMGN1-208ENST00000443046 METTL18O95568 372 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms