RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 MTHFD1P11586 935 aaKnown RBP19.01■□□□□ 0.63
APTR-204ENST00000440088 VARSP26640 1264 aaKnown RBP19.01■□□□□ 0.63
APTR-204ENST00000440088 PDCD4Q53EL6 469 aaKnown RBP19.01■□□□□ 0.63
APTR-204ENST00000440088 SLC30A9Q6PML9 568 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 FUNDC1Q8IVP5 155 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 C2orf73Q8N5S3 287 aaPredicted RBP19.01■□□□□ 0.63
APTR-204ENST00000440088 KYQ8NBH2 561 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 WDR20Q8TBZ3 569 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 SH3KBP1Q96B97 665 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 WDR34Q96EX3 536 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 PCBD2Q9H0N5 130 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 SCHIP1Q9P0W5 487 aaPredicted RBP19.01■□□□□ 0.63
APTR-204ENST00000440088 COLEC10Q9Y6Z7 277 aa19.01■□□□□ 0.63
APTR-204ENST00000440088 LRP4O75096 1905 aa19■□□□□ 0.63
APTR-204ENST00000440088 RASSF9O75901 435 aa19■□□□□ 0.63
APTR-204ENST00000440088 C1GALT1C1LP0DN25 315 aa19■□□□□ 0.63
APTR-204ENST00000440088 ITGAXP20702 1163 aa19■□□□□ 0.63
APTR-204ENST00000440088 RAB28P51157 221 aa19■□□□□ 0.63
APTR-204ENST00000440088 ILF3Q12906 894 aaKnown RBP eCLIP19■□□□□ 0.63
APTR-204ENST00000440088 TCEA2Q15560 299 aa19■□□□□ 0.63
APTR-204ENST00000440088 MMEL1Q495T6 779 aa19■□□□□ 0.63
APTR-204ENST00000440088 PAGE2BQ5JRK9 111 aa19■□□□□ 0.63
APTR-204ENST00000440088 CATSPEREQ5SY80 951 aa19■□□□□ 0.63
APTR-204ENST00000440088 IL23RQ5VWK5 629 aa19■□□□□ 0.63
APTR-204ENST00000440088 LPCAT2Q7L5N7 544 aa19■□□□□ 0.63
APTR-204ENST00000440088 CCL4L1Q8NHW4 92 aa19■□□□□ 0.63
APTR-204ENST00000440088 MRPL1Q9BYD6 325 aaKnown RBP19■□□□□ 0.63
APTR-204ENST00000440088 ZIM2Q9NZV7 527 aa19■□□□□ 0.63
APTR-204ENST00000440088 SH2B3Q9UQQ2 575 aa19■□□□□ 0.63
APTR-204ENST00000440088 EIF3LQ9Y262 564 aaKnown RBP19■□□□□ 0.63
APTR-204ENST00000440088 KDM1AO60341 852 aa19■□□□□ 0.63
APTR-204ENST00000440088 PRPH2P23942 346 aa19■□□□□ 0.63
APTR-204ENST00000440088 CD27P26842 260 aa19■□□□□ 0.63
APTR-204ENST00000440088 CSTF3Q12996 717 aaKnown RBP19■□□□□ 0.63
APTR-204ENST00000440088 ART3Q13508 389 aa19■□□□□ 0.63
APTR-204ENST00000440088 MED27Q6P2C8 311 aa19■□□□□ 0.63
APTR-204ENST00000440088 NXPE4Q6UWF7 544 aa19■□□□□ 0.63
APTR-204ENST00000440088 ZFAND4Q86XD8 727 aa19■□□□□ 0.63
APTR-204ENST00000440088 REPS1Q96D71 796 aa19■□□□□ 0.63
APTR-204ENST00000440088 KLHDC7BQ96G42 594 aa19■□□□□ 0.63
APTR-204ENST00000440088 SPACA7Q96KW9 195 aa19■□□□□ 0.63
APTR-204ENST00000440088 SLC6A18Q96N87 628 aa19■□□□□ 0.63
APTR-204ENST00000440088 IER2Q9BTL4 223 aa19■□□□□ 0.63
APTR-204ENST00000440088 THTPAQ9BU02 230 aa19■□□□□ 0.63
APTR-204ENST00000440088 TMEM45AQ9NWC5 275 aa19■□□□□ 0.63
APTR-204ENST00000440088 NDE1Q9NXR1 346 aa19■□□□□ 0.63
APTR-204ENST00000440088 INVSQ9Y283 1065 aa19■□□□□ 0.63
APTR-204ENST00000440088 POLR3HQ9Y535 204 aaPredicted RBP19■□□□□ 0.63
APTR-204ENST00000440088 GON4LQ3T8J9 2241 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 NPIPB8E9PQR5 432 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 SLC22A3O75751 556 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 NDUFS1P28331 727 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 RPL6Q02878 288 aaKnown RBP18.99■□□□□ 0.63
APTR-204ENST00000440088 C10orf62Q5T681 223 aaPredicted RBP18.99■□□□□ 0.63
APTR-204ENST00000440088 CYP20A1Q6UW02 462 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 C16orf89Q6UX73 402 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 C17orf64Q86WR6 236 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 PARP9Q8IXQ6 854 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 DEFB107AQ8IZN7 70 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 OR7G3Q8NG95 312 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 OR52E1Q8NGJ3 308 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 MTERF1Q99551 399 aaKnown RBP18.99■□□□□ 0.63
APTR-204ENST00000440088 NRTNQ99748 197 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 ACAT2Q9BWD1 397 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 TAC3Q9UHF0 121 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 VCANP13611 3396 aa18.99■□□□□ 0.63
APTR-204ENST00000440088 NR5A2O00482 541 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 G6PDP11413 515 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 HSD3B1P14060 373 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 HSD3B2P26439 372 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 LAPTM5Q13571 262 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 FZD2Q14332 565 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 SLBPQ14493 270 aaKnown RBP eCLIP18.98■□□□□ 0.63
APTR-204ENST00000440088 HIST2H2ACQ16777 129 aaPredicted RBP18.98■□□□□ 0.63
APTR-204ENST00000440088 CACHD1Q5VU97 1274 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 HIST2H2AA3Q6FI13 130 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 CYB5D1Q6P9G0 228 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 PHACTR4Q8IZ21 702 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 DSELQ8IZU8 1212 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 DEFB119Q8N690 84 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 LINC01555Q8NAE3 123 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 FAM13CQ8NE31 585 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 TSPEARQ8WU66 669 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 CMTM7Q96FZ5 175 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 NPAS2Q99743 824 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 BRF2Q9HAW0 419 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 GEMIN8Q9NWZ8 242 aaKnown RBP18.98■□□□□ 0.63
APTR-204ENST00000440088 ASIC5Q9NY37 505 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 SLCO1B1Q9Y6L6 691 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 BBIP1A8MTZ0 92 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 AXIN1O15169 862 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 NRP2O60462 931 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 EML2O95834 649 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 F3P13726 295 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 PKLRP30613 574 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 UFM1P61960 85 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 EIF2B5Q13144 721 aaKnown RBP18.98■□□□□ 0.63
APTR-204ENST00000440088 DDX39BQ13838 428 aaKnown RBP18.98■□□□□ 0.63
APTR-204ENST00000440088 BLOC1S3Q6QNY0 202 aa18.98■□□□□ 0.63
APTR-204ENST00000440088 NRROSQ86YC3 692 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms