RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CDC7O00311 574 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 SSX4O60224 188 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 CREG1O75629 220 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 HTR3AP46098 478 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 MAXP61244 160 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 ZFP69Q49AA0 526 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 BRMS1LQ5PSV4 323 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 PAQR3Q6TCH7 311 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 UBQLNLQ8IYU4 475 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 SMRP1Q8NCR6 262 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 OR10T2Q8NGX3 314 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 DEPDC7Q96QD5 511 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 BARD1Q99728 777 aaKnown RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 CDADC1Q9BWV3 514 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 TM9SF3Q9HD45 589 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 ERVW-1Q9UQF0 538 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 PCDHGB6Q9Y5F9 930 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 BACE2Q9Y5Z0 518 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 A0A1W2PQ67 120 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 CENPXA8MT69 81 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 NRG2O14511 850 aaPredicted RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 STX16O14662 325 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 DSCR3O14972 297 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 SYN3O14994 580 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 ANKRD28O15084 1053 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 FGF10O15520 208 aaPredicted RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 TGM5O43548 720 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 LDB2O43679 373 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 OAZ2O95190 189 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 MED26O95402 600 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 GADD45AP24522 165 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 KRT20P35900 424 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 PPP3CCP48454 512 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 DAPP51397 102 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 PTPRCAPQ14761 206 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 LAPTM4AQ15012 233 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 MAD2L1BPQ15013 274 aaPredicted RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 SIRPB2Q5JXA9 342 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 MRNIPQ6NTE8 343 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 ZCCHC8Q6NZY4 707 aaKnown RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 PRR23CQ6ZRP0 262 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 AHSA2Q719I0 299 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 GPR149Q86SP6 731 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 SIMC1Q8NDZ2 872 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 IPCEF1Q8WWN9 437 aaPredicted RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 FUBP1Q96AE4 644 aaKnown RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 ESAMQ96AP7 390 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 C1QTNF3Q9BXJ4 246 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 CRISPLD1Q9H336 500 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 IGFLR1Q9H665 355 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 SYTL2Q9HCH5 934 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 MRPL17Q9NRX2 175 aaKnown RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 QPCTLQ9NXS2 382 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 RNF6Q9Y252 685 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 WBP11Q9Y2W2 641 aaKnown RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 POLR3HQ9Y535 204 aaPredicted RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 TIMM13Q9Y5L4 95 aaPredicted RBP8.34□□□□□ -1.07
HPS4-206ENST00000439453 COMMD10Q9Y6G5 202 aa8.34□□□□□ -1.07
HPS4-206ENST00000439453 NPEPPSL1A6NEC2 478 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 RHOBTB1O94844 696 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 SERPINA1P01009 418 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 URODP06132 367 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 RETP07949 1114 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 SERPINF2P08697 491 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 CTSKP43235 329 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 GNG2P59768 71 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 DSC2Q02487 901 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 LEXMQ3ZCV2 418 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 PRSS36Q5K4E3 855 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 CPZQ66K79 652 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 ANKRD54Q6NXT1 300 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 GALNT12Q8IXK2 581 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 SLC13A3Q8WWT9 602 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 SUSD6Q92537 303 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 SENP8Q96LD8 212 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 CDK15Q96Q40 435 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 TMEM246Q9BRR3 403 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 NUAK2Q9H093 628 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 PRDM8Q9NQV8 689 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 EHD3Q9NZN3 535 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 BOLA1Q9Y3E2 137 aa8.34□□□□□ -1.08
HPS4-206ENST00000439453 HHLA1C9JL84 531 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 PAGE1O75459 146 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 ABLIM3O94929 683 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 EFNA1P20827 205 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 HOXC13P31276 330 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 RAD51Q06609 339 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 IHHQ14623 411 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 KIAA0040Q15053 153 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 CARD16Q5EG05 197 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 TTC29Q8NA56 475 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 OR10Q1Q8NGQ4 319 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 GPR150Q8NGU9 434 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 RASSF5Q8WWW0 418 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 GTF2H4Q92759 462 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 SIGLEC11Q96RL6 698 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 GABARAPL1Q9H0R8 117 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 OSER1Q9NX31 292 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 CLDND1Q9NY35 253 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms