RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 B3GALT4O96024 378 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 KIR3DL1P43629 444 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 RBM48Q5RL73 367 aaKnown RBP18.04■□□□□ 0.48
CLK1-205ENST00000434813 SPESP1Q6UW49 350 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 SERPINA11Q86U17 422 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 TCEAL4Q96EI5 215 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 EGLN2Q96KS0 407 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 ZSCAN5AQ9BUG6 496 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 SMURF2Q9HAU4 748 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 SPHK2Q9NRA0 654 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 FAM118AQ9NWS6 357 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 ETAA1Q9NY74 926 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 ERVW-1Q9UQF0 538 aa18.04■□□□□ 0.48
CLK1-205ENST00000434813 UPK3BL1B0FP48 263 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 UPK3BL2E5RIL1 263 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 LRATO95237 230 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 SYN1P17600 705 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 DCTP40126 519 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 MAGEA2P43356 314 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 TRPC1P48995 793 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 DCTN2Q13561 401 aaKnown RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 TEAD2Q15562 447 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 OR4F3Q6IEY1 312 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 Q6ZVL8 140 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 ZNF555Q8NEP9 628 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 FRS2Q8WU20 508 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 PYURFQ96I23 114 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 AMBRA1Q9C0C7 1298 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 PCDH12Q9NPG4 1184 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 RWDD3Q9Y3V2 267 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 ANKRD33BA6NCL7 494 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 HIDE1A8MVS5 230 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 FADS2P1A8MWK0 482 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 H3BMQ9 156 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 MOSPD3O75425 235 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 PSIP1O75475 530 aaKnown RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 LEFTY1O75610 366 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 FGF19O95750 216 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 JUNBP17275 347 aaPredicted RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 CD22P20273 847 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 ETV3P41162 512 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 IRF8Q02556 426 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 BROXQ5VW32 411 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 TMEM215Q68D42 235 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 CES5AQ6NT32 575 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 KIAA0907Q7Z7F0 614 aaPredicted RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 KLHDC8AQ8IYD2 350 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 HS3ST5Q8IZT8 346 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 MRPL43Q8N983 215 aaKnown RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 WDR20Q8TBZ3 569 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 POF1BQ8WVV4 589 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 HDAC2Q92769 488 aaKnown RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 COG8Q96MW5 612 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 TDP1Q9NUW8 608 aa18.03■□□□□ 0.48
CLK1-205ENST00000434813 THG1LQ9NWX6 298 aaKnown RBP18.03■□□□□ 0.48
CLK1-205ENST00000434813 TRIM64BA6NI03 449 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 ARHGEF33A8MVX0 844 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 NOBOXO60393 691 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 CCNDBP1O95273 360 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 MYCLP1P12525 358 aaPredicted RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 MAP4P27816 1152 aaKnown RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 PIGAP37287 484 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 C21orf58P58505 322 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 SRSF11Q05519 484 aaKnown RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 VAC14Q08AM6 782 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 ABRQ12979 859 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 SLC14A1Q13336 389 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 DUOXA1Q1HG43 343 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 CHST15Q7LFX5 561 aaPredicted RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 ZNF551Q7Z340 670 aaPredicted RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 SYT12Q8IV01 421 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 GLMNQ92990 594 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 GFM2Q969S9 779 aaKnown RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 MRGPRX3Q96LB0 322 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 RIOK2Q9BVS4 552 aaKnown RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 EBPLQ9BY08 206 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 REXO4Q9GZR2 422 aaKnown RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 SPATA6Q9NWH7 488 aaPredicted RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 TMEM9Q9P0T7 183 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 C3orf18Q9UK00 162 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 SAMD4AQ9UPU9 718 aaKnown RBP18.02■□□□□ 0.48
CLK1-205ENST00000434813 PCDHGA8Q9Y5G5 932 aa18.02■□□□□ 0.48
CLK1-205ENST00000434813 OR2AG2A6NM03 316 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 TIMP2P16035 220 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 POLR2EP19388 210 aaKnown RBP18.01■□□□□ 0.47
CLK1-205ENST00000434813 CRHBPP24387 322 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 POLR2IP36954 125 aaKnown RBP18.01■□□□□ 0.47
CLK1-205ENST00000434813 RPS6KA3P51812 740 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 KCNAB2Q13303 367 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 NEDD8Q15843 81 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 ZNF77Q15935 545 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 UGT8Q16880 541 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 SYTL3Q4VX76 610 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 ARHGAP15Q53QZ3 475 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 LY6G5CQ5SRR4 150 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 GPR107Q5VW38 600 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 DOK6Q6PKX4 331 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 DPPA4Q7L190 304 aa18.01■□□□□ 0.47
CLK1-205ENST00000434813 TMEM179BQ7Z7N9 219 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms