RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 AGTRAPQ6RW13 159 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 ZNF517Q6ZMY9 492 aaPredicted RBP17.64■□□□□ 0.41
HLA-F-220ENST00000434407 TMEM126BQ8IUX1 230 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 SLC38A9Q8NBW4 561 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 GALNT6Q8NCL4 622 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 FBXL8Q96CD0 374 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 HIST1H2AHQ96KK5 128 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 HIST1H2AJQ99878 128 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 H2AFJQ9BTM1 129 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 ACAT2Q9BWD1 397 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 SGPP1Q9BX95 441 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 TRIM54Q9BYV2 358 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 SLC6A20Q9NP91 592 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 MRPS30Q9NP92 439 aaKnown RBP17.64■□□□□ 0.41
HLA-F-220ENST00000434407 EURLQ9NYK6 297 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 TAC3Q9UHF0 121 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 ATMQ13315 3056 aa17.64■□□□□ 0.41
HLA-F-220ENST00000434407 LOC101059948A0A1B0GTJ6 334 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 NPEPPSL1A6NEC2 478 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 K7ENP7 123 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CCNDBP1O95273 360 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 NTRK1P04629 796 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 SLC35E2BP0CK96 405 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CCDC166P0CW27 439 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 MYBL2P10244 700 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CCND1P24385 295 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CRABP2P29373 138 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 SLC26A3P40879 764 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 GCGRP47871 477 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 TMPRSS3P57727 454 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 TBPL1P62380 186 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 RELAQ04206 551 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 DEFB110Q30KQ9 67 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 ZC3H12BQ5HYM0 836 aaKnown RBP17.63■□□□□ 0.41
HLA-F-220ENST00000434407 MANEAQ5SRI9 462 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 PRAMEF17Q5VTA0 474 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 INO80CQ6PI98 192 aaPredicted RBP17.63■□□□□ 0.41
HLA-F-220ENST00000434407 RNF44Q7L0R7 432 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CCDC91Q7Z6B0 441 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 ADAMTSL2Q86TH1 951 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 VASH2Q86V25 355 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 MCATQ8IVS2 390 aaKnown RBP17.63■□□□□ 0.41
HLA-F-220ENST00000434407 IL22RA1Q8N6P7 574 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 OR56A3Q8NH54 315 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CRELD1Q96HD1 420 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 PLCD4Q9BRC7 762 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 DPH7Q9BTV6 452 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 PCBD2Q9H0N5 130 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 ANKZF1Q9H8Y5 726 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CCDC177Q9NQR7 707 aaPredicted RBP17.63■□□□□ 0.41
HLA-F-220ENST00000434407 ARL15Q9NXU5 204 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 CTNNAL1Q9UBT7 734 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 OARD1Q9Y530 152 aa17.63■□□□□ 0.41
HLA-F-220ENST00000434407 IGSF10Q6WRI0 2623 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 A0A087WUV0 522 aaPredicted RBP17.62■□□□□ 0.41
HLA-F-220ENST00000434407 E7EQ34 232 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 RIPK2O43353 540 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 CTSBP07858 339 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 CD1DP15813 335 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 WT1P19544 449 aaPredicted RBP17.62■□□□□ 0.41
HLA-F-220ENST00000434407 RORAP35398 523 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 PMS2P54278 862 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 ATP6V0D1P61421 351 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 NAE1Q13564 534 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 TSNQ15631 228 aaKnown RBP17.62■□□□□ 0.41
HLA-F-220ENST00000434407 MROH9Q5TGP6 573 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 FBXO42Q6P3S6 717 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 CMC1Q7Z7K0 106 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 PAQR7Q86WK9 346 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 GPR135Q8IZ08 494 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 ATL1Q8WXF7 558 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.62■□□□□ 0.41
HLA-F-220ENST00000434407 ISL2Q96A47 359 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 PAFAH2Q99487 392 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 SPRTNQ9H040 489 aaPredicted RBP17.62■□□□□ 0.41
HLA-F-220ENST00000434407 ATG10Q9H0Y0 220 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 EPB41L4BQ9H329 900 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 CPNE5Q9HCH3 593 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 LHX9Q9NQ69 397 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 PLSCR2Q9NRY7 297 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 ZNF180Q9UJW8 692 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 PADI1Q9ULC6 663 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 AP1M2Q9Y6Q5 423 aa17.62■□□□□ 0.41
HLA-F-220ENST00000434407 ZNF749O43361 778 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 NRP2O60462 931 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 SRPX2O60687 465 aaPredicted RBP17.61■□□□□ 0.41
HLA-F-220ENST00000434407 OR2B3O76000 313 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 LIFP15018 202 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 HRH2P25021 359 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 VAC14Q08AM6 782 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 DLG1Q12959 904 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 GPS2Q13227 327 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 TSTA3Q13630 321 aaPredicted RBP17.61■□□□□ 0.41
HLA-F-220ENST00000434407 BMPR2Q13873 1038 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 CDKL4Q5MAI5 379 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 PRAMEF13Q5VWM6 474 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 ZNF385CQ66K41 422 aaPredicted RBP17.61■□□□□ 0.41
HLA-F-220ENST00000434407 TLDC1Q6P9B6 456 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 LCTLQ6UWM7 567 aa17.61■□□□□ 0.41
HLA-F-220ENST00000434407 CCDC81Q6ZN84 652 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms